[Bioperl-l] Can't locate Bio/seqIO.pm in @INC

Chris Fields cjfields at illinois.edu
Thu Oct 21 11:02:35 EDT 2010


Check your spelling (note the caps below):

use Bio::SeqIO;

chris

On Oct 19, 2010, at 6:50 AM, yusheng liao wrote:

> Can't locate Bio/seqIO.pm in @INC 
> I try to run a .pl file to get multi sequences for t
> he GenBank using the
> Bioperl. The following were the error message:
> linux:/home/liaoy # perl hsv-1.pl
> Can't locate Bio/seqIO.pm in @INC (@INC contains:
> /usr/lib/perl5/5.8.7/i586-linux-thread-multi /usr/lib/perl5/5.8.7
> /usr/lib/perl5/site_perl/5.8.7/i586-linux-thread-multi
> /usr/lib/perl5/site_perl/5.8.7 /usr/lib/perl5/site_perl
> /usr/lib/perl5/vendor_perl/5.8.7/i586-linux-thread-multi
> /usr/lib/perl5/vendor_perl/5.8.7 /usr/lib/perl5/vendor_perl .)
> at hsv-1.pl line 4.
> BEGIN failed--compilation aborted at hsv-1.pl line 4.
> 
> what is the problem? And how to corret it? 
> 
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