October 2010 Archives by thread

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Starting: Fri Oct 1 11:45:35 EDT 2010
Ending: Fri Oct 29 10:34:41 EDT 2010
Messages: 125

• [Bioperl-l] [Gmod-gbrowse] bp_seqfeature_delete.PL - where should I submit a patch?   Scott Cain
  • [Bioperl-l] [Gmod-gbrowse] bp_seqfeature_delete.PL - where should I submit a patch?   Chris Fields
  • [Bioperl-l] [Gmod-gbrowse] bp_seqfeature_delete.PL - where should I submit a patch?   Dan Bolser
• [Bioperl-l] Spam on the wiki: best way to report it?   Dan Bolser
  • [Bioperl-l] Spam on the wiki: best way to report it?   Chris Fields
• [Bioperl-l] Bioperl sim4 parse   Jason Stajich
• [Bioperl-l] bioperl version for ensembl Was: Retrieve Sequence from Ensembl gene id   Albert Vilella
• [Bioperl-l] Question about Bio::Coordinate::Pair   Dan Bolser
  • [Bioperl-l] Question about Bio::Coordinate::Pair   Dan Bolser
    • [Bioperl-l] Question about Bio::Coordinate::Pair   Dan Bolser
• [Bioperl-l] how to identify least degeneracy for a conserved region among all conserved regions in an amino acid alignment?   gandipalem
• [Bioperl-l] Installing Bio::DB::BigWig ?   Dan Bolser
  • [Bioperl-l] Installing Bio::DB::BigWig ?   Dan Bolser
    • [Bioperl-l] [Gmod-gbrowse] Installing Bio::DB::BigWig ?   Lincoln Stein
      • [Bioperl-l] [Gmod-gbrowse] Installing Bio::DB::BigWig ?   Dan Bolser
• [Bioperl-l] FW: bp_genbank2gff3- Unflattening error   Jayaraman, Pushkala
• [Bioperl-l] Getting BioPerl from Github   tim
  • [Bioperl-l] Getting BioPerl from Github   Scott Cain
    • [Bioperl-l] Getting BioPerl from Github   Kai Blin
    • [Bioperl-l] Getting BioPerl from Github   Dave Messina
• [Bioperl-l] Bio::Matrix::MatrixI   Dave Messina
  • [Bioperl-l] Bio::Matrix::MatrixI   Chris Fields
• [Bioperl-l] Pdoc documentation & test coverage updated   Mauricio Herrera Cuadra
  • [Bioperl-l] Pdoc documentation & test coverage updated   Chris Fields
    • [Bioperl-l] Pdoc documentation & test coverage updated   Jason Stajich
• [Bioperl-l] possible bug in Bio::SeqIO::fastq   Albert Vilella
  • [Bioperl-l] possible bug in Bio::SeqIO::fastq   Chris Fields
• [Bioperl-l] fastq Problem   shalabh sharma
  • [Bioperl-l] fastq Problem   Chris Fields
    • [Bioperl-l] fastq Problem   shalabh sharma
• [Bioperl-l] possible bug in Bio::SeqIO::fastq   Albert Vilella
• [Bioperl-l] Next-gen flu informatics   Mark A. Jensen
• [Bioperl-l] Extracting sequences from MySQL DB with Bio::DB::GFF   Darwin Sorento Dichmann
  • [Bioperl-l] Extracting sequences from MySQL DB with Bio::DB::GFF   Scott Cain
    • [Bioperl-l] Extracting sequences from MySQL DB with Bio::DB::GFF   Darwin Sorento Dichmann
• [Bioperl-l] Installing BioPerl on New mac 10.6.4   Matt Estep
  • [Bioperl-l] Installing BioPerl on New mac 10.6.4   Scott Cain
    • [Bioperl-l] Installing BioPerl on New mac 10.6.4   Bill Stephens
      • [Bioperl-l] Installing BioPerl on New mac 10.6.4   Matt Estep
• [Bioperl-l] cis-regulatory elements   Farkas, Illes
  • [Bioperl-l] cis-regulatory elements   Jun Yin
    • [Bioperl-l] cis-regulatory elements   Chris Fields
• [Bioperl-l] Generating a consensus sequence from a Clustal alignment   Bill Stephens
  • [Bioperl-l] Generating a consensus sequence from a Clustal alignment   Chris Fields
    • [Bioperl-l] Generating a consensus sequence from a Clustal alignment   Bill Stephens
    • [Bioperl-l] Generating a consensus sequence from a Clustal alignment   Jun Yin
      • [Bioperl-l] Generating a consensus sequence from a Clustal alignment   Bill Stephens
      • [Bioperl-l] Generating a consensus sequence from a Clustal alignment   Thomas Sharpton
      • [Bioperl-l] Generating a consensus sequence from a Clustal alignment   Jun Yin
      • [Bioperl-l] Generating a consensus sequence from a Clustal alignment   Chris Fields
      • [Bioperl-l] Generating a consensus sequence from a Clustal alignment   Bill Stephens
• [Bioperl-l] bioperl easy way installation using cpan   Cristiano Elena
  • [Bioperl-l] bioperl easy way installation using cpan   Scott Cain
    • [Bioperl-l] bioperl easy way installation using cpan   Chris Fields
• [Bioperl-l] DNAStatistics   Sarah Kingan
  • [Bioperl-l] DNAStatistics   Dave Messina
• [Bioperl-l] correlated mutations analysis   José Ramón Blas Pastor
• [Bioperl-l] Can't locate Bio/seqIO.pm in @INC   yusheng liao
  • [Bioperl-l] Can't locate Bio/seqIO.pm in @INC   Chris Fields
  • [Bioperl-l] Can't locate Bio/seqIO.pm in @INC   yifangt
• [Bioperl-l] IPC/Run.pm?   T D
• [Bioperl-l] IPC/Run.pm?   T D
  • [Bioperl-l] IPC/Run.pm?   Chris Fields
    • [Bioperl-l] IPC/Run.pm?   T D
      • [Bioperl-l] IPC/Run.pm?   Chris Fields
      • [Bioperl-l] IPC/Run.pm?   Robert Buels
• [Bioperl-l] Help in retrieving the DEFINITION line   ANJAN PURKAYASTHA
  • [Bioperl-l] Help in retrieving the DEFINITION line   Dave Messina
• [Bioperl-l] Mummer parser and data anlysis   shalabh sharma
  • [Bioperl-l] Mummer parser and data anlysis   Dave Messina
    • [Bioperl-l] Mummer parser and data anlysis   shalabh sharma
  • [Bioperl-l] Mummer parser and data anlysis   Chris Fields
    • [Bioperl-l] Mummer parser and data anlysis   shalabh sharma
      • [Bioperl-l] Mummer parser and data anlysis   Chris Fields
      • [Bioperl-l] Mummer parser and data anlysis   shalabh sharma
• [Bioperl-l] treeio->write_tree problem   Jim Hu
  • [Bioperl-l] treeio->write_tree problem   Chris Fields
  • [Bioperl-l] treeio->write_tree problem   Adam Witney
    • [Bioperl-l] treeio->write_tree problem   Chris Fields
• [Bioperl-l] treeio->write_tree problem   Jim Hu
• [Bioperl-l] IPC/Run.pm?   Mark A. Jensen
  • [Bioperl-l] IPC/Run.pm?   Chris Fields
• [Bioperl-l] how to download PDB files using Bioperl script   ashwani sharma
  • [Bioperl-l] how to download PDB files using Bioperl script   Jun Yin
    • [Bioperl-l] how to download PDB files using Bioperl script   Christopher Bottoms
• [Bioperl-l] Failed to load module Bio::SeqIO::swiss   Chaogu Zheng
  • [Bioperl-l] Failed to load module Bio::SeqIO::swiss   Chris Fields
    • [Bioperl-l] Failed to load module Bio::SeqIO::swiss   Chaogu Zheng
• [Bioperl-l] Does $tree->remove_Node prune or splice?   Jim Hu
• [Bioperl-l] Specifying the search set in NCBI BLAST   Iago Lowe
  • [Bioperl-l] Specifying the search set in NCBI BLAST   Dave Messina
    • [Bioperl-l] Specifying the search set in NCBI BLAST   Cook, Malcolm
• [Bioperl-l] Question on BioPerl modules   Jason Stajich
• [Bioperl-l] Installing Bioperl from Git Hub   Tim
• [Bioperl-l] can't install bioperl 1.6.1   Andrea Edwards
• [Bioperl-l] Need Help regarding reciprocal BLAST using BioPerl   sangita saha
• [Bioperl-l] Fwd: Need Help regarding reciprocal BLAST using BioPerl   sangita saha
  • [Bioperl-l] Fwd: Need Help regarding reciprocal BLAST using BioPerl   shalabh sharma
    • [Bioperl-l] Fwd: Need Help regarding reciprocal BLAST using BioPerl   Chris Fields
• [Bioperl-l] Genome Information   shalabh sharma
  • [Bioperl-l] Genome Information   Chris Fields
    • [Bioperl-l] Genome Information   shalabh sharma
• [Bioperl-l] default Bio::DB::SwissProt server broken?   Matthew Conte
  • [Bioperl-l] default Bio::DB::SwissProt server broken?   Chris Fields
    • [Bioperl-l] default Bio::DB::SwissProt server broken?   Hamish McWilliam
      • [Bioperl-l] default Bio::DB::SwissProt server broken?   Chris Fields
      • [Bioperl-l] default Bio::DB::SwissProt server broken?   Hamish McWilliam
      • [Bioperl-l] default Bio::DB::SwissProt server broken?   Chris Fields
• [Bioperl-l] TreeIO for NHX format   Ameet Talwalkar
  • [Bioperl-l] TreeIO for NHX format   Chris Fields
• [Bioperl-l] A problem on BioPerl module Bio::DB::Fasta   Tao Zhu
  • [Bioperl-l] A problem on BioPerl module Bio::DB::Fasta   Chris Fields
    • [Bioperl-l] A problem on BioPerl module Bio::DB::Fasta   Tao Zhu
• [Bioperl-l] Tiling of hsps using Bioperl   seidl-michael
• [Bioperl-l] A problem on BioPerl module Bio::DB::Fasta   Chris Fields
• [Bioperl-l] Installation of bioperl on Ubuntu   Andrea Edwards
  • [Bioperl-l] Installation of bioperl on Ubuntu   Minh Bui
  • [Bioperl-l] Installation of bioperl on Ubuntu   Chris Fields
• [Bioperl-l] Bio::SeqFeature::Generic and Inheritance Question   Daniel Standage
  • [Bioperl-l] Bio::SeqFeature::Generic and Inheritance Question   Scott Cain
• [Bioperl-l] about git and perl5lib   Dimitar Kenanov
  • [Bioperl-l] about git and perl5lib   Dave Messina
• [Bioperl-l] Bio::SeqFeature::Generic and Inheritance Question   Scott Cain
  • [Bioperl-l] Bio::SeqFeature::Generic and Inheritance Question   Scott Cain
    • [Bioperl-l] Bio::SeqFeature::Generic and Inheritance Question   Daniel Standage

Last message date: Fri Oct 29 10:34:41 EDT 2010
Archived on: Fri Oct 29 10:46:26 EDT 2010

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