[Bioperl-l] Bio::SearchIO::hmmer

Kai Blin kai.blin at biotech.uni-tuebingen.de
Thu Sep 2 04:44:58 EDT 2010


On Wed, 1 Sep 2010 14:29:26 -0700
Thomas Sharpton <thomas.sharpton at gmail.com> wrote:

Hi,

> We forked the SearchIO parser for hmmer3 and hmmer2. You'll want to  
> use the HMMER3 version, as found here:
> 
> http://github.com/bioperl/bioperl-hmmer3

Actually it's now included in the bioperl-live repository, but the code
hasn't made it into a release yet.

http://github.com/bioperl/bioperl-live.git

Cheers,
Kai
-- 
Dipl.-Inform. Kai Blin         kai.blin at biotech.uni-tuebingen.de
Institute for Microbiology and Infection Medicine
Division of Microbiology/Biotechnology
Eberhard-Karls-University of Tübingen
Auf der Morgenstelle 28                 Phone : ++49 7071 29-78841
D-72076 Tübingen                        Fax :   ++49 7071 29-5979
Deutschland
Homepage: http://www.mikrobio.uni-tuebingen.de/ag_wohlleben



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