heikki.lehvaslaiho at gmail.com
Sat Sep 18 03:41:22 EDT 2010
Been running 1.6 and its betas on Blue Gene/P for months. The output
is identical to standard BLAST output. No issues in parsing it with
Heikki Lehvaslaiho - skype:heikki_lehvaslaiho
cell: +966 545 595 849 office: +966 2 808 2429
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On 16 September 2010 21:25, Dave Messina <David.Messina at sbc.su.se> wrote:
>> Is the there a standalone like module that allows you to easily call mpiblast?
> No, although with Mark Jensen's new WrapperBase system, writing one would probably be pretty straightforward.
>> I'm assuming seqio with parse a mpiblast output file correctly?
> Yes, although I see that a new version of mpiblast was recently released.
> Has anyone out there tested BioPerl against mpiBLAST 1.6.0 output yet?
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