[Bioperl-l] Retrieve Sequence from Ensembl gene id

Jun Yin jun.yin at ucd.ie
Thu Sep 30 09:36:31 EDT 2010


Hi, Chirag,

BioPerl does not have any module to retrieve data from Ensembl. But Ensembl
provides a BioPerl-like interface on that function.

You can visit Ensembl's website on how to use that module:
http://www.ensembl.org/info/data/api.html

Cheers,
Jun Yin
Ph.D. student in U.C.D.

Bioinformatics Laboratory
Conway Institute
University College Dublin


-----Original Message-----
From: bioperl-l-bounces at lists.open-bio.org
[mailto:bioperl-l-bounces at lists.open-bio.org] On Behalf Of chirag matkar
Sent: Thursday, September 30, 2010 1:21 PM
To: bioperl-l at lists.open-bio.org
Subject: [Bioperl-l] Retrieve Sequence from Ensembl gene id

Hello all,
Is there any module to fetch dna sequence data from ensemble gene id?

-- 
Regards,
Chirag Matkar
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