[Bioperl-l] Fwd: pls help..

Dave Messina David.Messina at sbc.su.se
Fri Aug 19 05:07:35 EDT 2011


Whoops, resending — the attachment was too big. Ravi, please provide only a
few example lines from your GFF file, or host the file elsewhere and post a
link to it.

Dave



---------- Forwarded message ----------
From: Dave Messina <David.Messina at sbc.su.se>
Date: Fri, Aug 19, 2011 at 10:53
Subject: pls help..
To: ravi.devani89 at gmail.com
Cc: bioperl-l <bioperl-l at lists.open-bio.org>


Ravi,

Your message belongs on the main BioPerl list, not the bioperl-dev list, so
I'm reposting it there. To sign up for the main list, go to:
http://bioperl.org/mailman/listinfo/bioperl-l

Dave



---------- Forwarded message ----------
From: Ravi Devani <ravi.devani89 at gmail.com>
To: bioperl-dev at lists.open-bio.org
Date: Fri, 19 Aug 2011 13:54:22 +0530
Subject: Fwd: pls help..
i tried to create a gff3 file from .gbk file using bioperl genbank2gff3
script but what i get is same features repeating many times.. and the file
keeps growing in size ntil my harddisk gets full.. i have tried to filter
all other features except "region" but still it repeats a single entry many
times..  i have attached a part of the file generated.. pls kindly help me.



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