[Bioperl-l] Possible bug in Bio::Tools::SeqStats->get_mol_wt?

Adam Sjøgren adsj at novozymes.com
Thu Mar 24 11:01:25 EDT 2011

On Thu, 24 Mar 2011 13:47:27 +0000, Roy wrote:

> This was due to my protein sequences ending with *, since they were
> derived from translating annotated genes including the stop codon.

If you give ->translate() the -complete=>1 option, the stop codon will
not be included in the resulting protein sequence.

 * http://bioperl.org/cgi-bin/deob_detail.cgi?method=Bio::PrimarySeqI::translate

  Best regards,


                                                          Adam Sjøgren
                                                    adsj at novozymes.com

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