March 2011 Archives by thread

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Starting: Tue Mar 1 06:22:54 EST 2011
Ending: Thu Mar 31 20:47:49 EDT 2011
Messages: 185

• [Bioperl-l] clustering trees obtained from phylip neighbor   moitrayee at mbu.iisc.ernet.in
  • [Bioperl-l] clustering trees obtained from phylip neighbor   Roy Chaudhuri
• [Bioperl-l] Plans for the next release (and beyond)   Dave Messina
  • [Bioperl-l] Plans for the next release (and beyond)   Chris Fields
    • [Bioperl-l] Plans for the next release (and beyond)   Dave Messina
• [Bioperl-l] building NGS pipeline   Adam Witney
• [Bioperl-l] GuessSeqFormat   Lee Katz
  • [Bioperl-l] GuessSeqFormat   Chris Fields
    • [Bioperl-l] GuessSeqFormat   Lee Katz
• [Bioperl-l] BioPerl POD   Daniel Standage
  • [Bioperl-l] BioPerl POD   Chris Fields
    • [Bioperl-l] BioPerl POD   Daniel Standage
• [Bioperl-l] Fwd: [Bosc] Bioinformatics Open Source Conference (BOSC 2011)--Call for Abstracts   Peter Cock
• [Bioperl-l] Bug in Bio::Restriction::Analysis   Steve Chervitz
  • [Bioperl-l] Bug in Bio::Restriction::Analysis   Chris Fields
    • [Bioperl-l] Bug in Bio::Restriction::Analysis   Chris Fields
      • [Bioperl-l] Bug in Bio::Restriction::Analysis   Steve Chervitz
    • [Bioperl-l] Bug in Bio::Restriction::Analysis   Elia Stupka
      • [Bioperl-l] Bug in Bio::Restriction::Analysis   Chris Fields
• [Bioperl-l] minicpan (CPAN::Mini) doesn't mirror BioPerl-1.6.1   George Hartzell
  • [Bioperl-l] minicpan (CPAN::Mini) doesn't mirror BioPerl-1.6.1   Chris Fields
    • [Bioperl-l] minicpan (CPAN::Mini) doesn't mirror BioPerl-1.6.1   George Hartzell
    • [Bioperl-l] minicpan (CPAN::Mini) doesn't mirror BioPerl-1.6.1   George Hartzell
      • [Bioperl-l] minicpan (CPAN::Mini) doesn't mirror BioPerl-1.6.1   Chris Fields
  • [Bioperl-l] minicpan (CPAN::Mini) doesn't mirror BioPerl-1.6.1   George Hartzell
• [Bioperl-l] Bioinformatics Open Source Conference (BOSC 2011)--Call for Abstracts   Brad Chapman
• [Bioperl-l] Please recommend Perl module to parse phylogentic trees   justin100
  • [Bioperl-l] Please recommend Perl module to parse phylogentic trees   Jason Stajich
• [Bioperl-l] Informatics job opportunity at NESCent   Hilmar Lapp
• [Bioperl-l] Job opening for GMOD User Support Specialist   Hilmar Lapp
• [Bioperl-l] bioperl-ext installation   Michael Rosen
• [Bioperl-l] call for project ideas - Google Summer of Code   Robert Buels
• [Bioperl-l] locate introns in a protein sequence   Tao Zhu
  • [Bioperl-l] locate introns in a protein sequence   Jason Stajich
• [Bioperl-l] Bio::Phylo vs Bio:TreeIO; interface to Fitch   Justin Li
• [Bioperl-l] From Blast hits to Taxanomy lineage for Short DNA Sequences (reads)   Abhishek Pratap
  • [Bioperl-l] From Blast hits to Taxanomy lineage for Short DNA Sequences (reads)   Miguel Pignatelli
    • [Bioperl-l] From Blast hits to Taxanomy lineage for Short DNA Sequences (reads)   shalabh sharma
      • [Bioperl-l] From Blast hits to Taxanomy lineage for Short DNA Sequences (reads)   Abhishek Pratap
      • [Bioperl-l] From Blast hits to Taxanomy lineage for Short DNA Sequences (reads)   Ian Mc Dowell
      • [Bioperl-l] From Blast hits to Taxanomy lineage for Short DNA Sequences (reads)   shalabh sharma
      • [Bioperl-l] From Blast hits to Taxanomy lineage for Short DNA Sequences (reads)   Ian Mc Dowell
      • [Bioperl-l] From Blast hits to Taxanomy lineage for Short DNA Sequences (reads)   shalabh sharma
• [Bioperl-l] Local blast hit (hsp_hseq) extracted from fasta file   Ian Mc Dowell
  • [Bioperl-l] Local blast hit (hsp_hseq) extracted from fasta file   Hans-Rudolf Hotz
• [Bioperl-l] update Google Summer of Code project ideas   Robert Buels
• [Bioperl-l] slit sequence with BioPerl by ID-query   marcocirilli
• [Bioperl-l] bioperl wiki spam   Chris Fields
  • [Bioperl-l] bioperl wiki spam   Scott Cain
    • [Bioperl-l] bioperl wiki spam   Chris Fields
      • [Bioperl-l] bioperl wiki spam   Hilmar Lapp
      • [Bioperl-l] bioperl wiki spam   Chris Fields
      • [Bioperl-l] bioperl wiki spam   Chris Fields
      • [Bioperl-l] bioperl wiki spam   Hilmar Lapp
      • [Bioperl-l] bioperl wiki spam   Chris Fields
      • [Bioperl-l] bioperl wiki spam   Chris Fields
      • [Bioperl-l] bioperl wiki spam   Hilmar Lapp
      • [Bioperl-l] bioperl wiki spam   Peter Cock
      • [Bioperl-l] bioperl wiki spam   Chris Fields
      • [Bioperl-l] bioperl wiki spam   Hilmar Lapp
      • [Bioperl-l] bioperl wiki spam   Chris Fields
      • [Bioperl-l] bioperl wiki spam   Hilmar Lapp
  • [Bioperl-l] bioperl wiki spam   Dave Messina
    • [Bioperl-l] bioperl wiki spam   George Hartzell
      • [Bioperl-l] bioperl wiki spam   Chris Fields
• [Bioperl-l] [ANNOUNCEMENT] Google Summer of Code   Chris Fields
• [Bioperl-l] how to prevent forced exit?   Ross KK Leung
  • [Bioperl-l] how to prevent forced exit?   Dave Messina
    • [Bioperl-l] how to prevent forced exit?   Ross KK Leung
      • [Bioperl-l] how to prevent forced exit?   Chris Fields
      • [Bioperl-l] how to prevent forced exit?   Jim Hu
      • [Bioperl-l] how to prevent forced exit?   Chris Fields
      • [Bioperl-l] how to prevent forced exit?   Jim Hu
      • [Bioperl-l] how to prevent forced exit?   Ross KK Leung
• [Bioperl-l] advice about bioperl-ext -- defunct?   Diego M. Vadell
  • [Bioperl-l] advice about bioperl-ext -- defunct?   Chris Fields
    • [Bioperl-l] advice about bioperl-ext -- defunct?   Diego M. Vadell
• [Bioperl-l] [ANNOUNCEMENT] Bugzilla to Redmine migration   Chris Fields
  • [Bioperl-l] [ANNOUNCEMENT] Bugzilla to Redmine migration   Jonathan "Duke" Leto
• [Bioperl-l] Perl/BioPerl   Simon Noël
• [Bioperl-l] [ANNOUNCEMENT] Bugzilla to Redmine migration   Chris Fields
• [Bioperl-l] [ANNOUNCEMENT] Bugzilla to Redmine migration   Chris Fields
  • [Bioperl-l] [ANNOUNCEMENT] Bugzilla to Redmine migration   Dave Messina
    • [Bioperl-l] [ANNOUNCEMENT] Bugzilla to Redmine migration   Chris Fields
• [Bioperl-l] Wiki login with OpenId   Adam Retchless
  • [Bioperl-l] Wiki login with OpenId   Chris Fields
• [Bioperl-l] Perl/BioPerl (Simon No?l)   Tao Zhu
• [Bioperl-l] What's wrong with the script about module Bio::SeqFeature::Gene::GeneStructure   Tao Zhu
  • [Bioperl-l] What's wrong with the script about module Bio::SeqFeature::Gene::GeneStructure   Hans-Rudolf Hotz
    • [Bioperl-l] What's wrong with the script about module Bio::SeqFeature::Gene::GeneStructure   Tao Zhu
      • [Bioperl-l] What's wrong with the script about module Bio::SeqFeature::Gene::GeneStructure   Chris Fields
      • [Bioperl-l] What's wrong with the script about module Bio::SeqFeature::Gene::GeneStructure   Tao Zhu
      • [Bioperl-l] What's wrong with the script about module Bio::SeqFeature::Gene::GeneStructure   Frank Schwach
      • [Bioperl-l] What's wrong with the script about module Bio::SeqFeature::Gene::GeneStructure   Tao Zhu
      • [Bioperl-l] What's wrong with the script about module Bio::SeqFeature::Gene::GeneStructure   Jason Stajich
      • [Bioperl-l] failure in unsubscription   Ross KK Leung
• [Bioperl-l] Please forward: collecting support for Japanese scientists   Rutger Vos
• [Bioperl-l] RemoteBlast   Suhail M
  • [Bioperl-l] RemoteBlast   shalabh sharma
• [Bioperl-l] Google Summer of Code is *ON* for OBF projects!   Robert Buels
  • [Bioperl-l] Google Summer of Code is *ON* for OBF projects!   Chris Fields
    • [Bioperl-l] failure in unsubscription   Ross KK Leung
      • [Bioperl-l] failure in unsubscription   Kevin Brown
      • [Bioperl-l] failure in unsubscription   Dave Messina
    • [Bioperl-l] Google Summer of Code is *ON* for OBF projects!   Dave Messina
      • [Bioperl-l] Google Summer of Code is *ON* for OBF projects!   Hilmar Lapp
      • [Bioperl-l] Google Summer of Code is *ON* for OBF projects!   Chirag Matkar
  • [Bioperl-l] Google Summer of Code is *ON* for OBF projects!   Jason Stajich
• [Bioperl-l] bio-scf installation error   manju rawat
• [Bioperl-l] Bioperl-l Digest, Vol 95, Issue 19   virendra patil
• [Bioperl-l] Ensembl stable_id_event table   Nathan (Nat) Goodman
  • [Bioperl-l] Ensembl stable_id_event table   Christopher Bottoms
  • [Bioperl-l] Ensembl stable_id_event table   Chris Fields
• [Bioperl-l] GSoC 2011   Fei Hu
  • [Bioperl-l] GSoC 2011   Dave Messina
• [Bioperl-l] Bio::Tools::Protparam   Thomas, Dallas
  • [Bioperl-l] Bio::Tools::Protparam   Chris Fields
  • [Bioperl-l] Bio::Tools::Protparam   Heikki Lehvaslaiho
• [Bioperl-l] Bioperl installation doubt   ¶•●๋•இரவிяανι●๋••¶
  • [Bioperl-l] Bioperl installation doubt   Dave Messina
• [Bioperl-l] Possible bug in Bio::Tools::SeqStats->get_mol_wt?   Roy Chaudhuri
  • [Bioperl-l] Possible bug in Bio::Tools::SeqStats->get_mol_wt?   Adam Sjøgren
    • [Bioperl-l] Possible bug in Bio::Tools::SeqStats->get_mol_wt?   Roy Chaudhuri
  • [Bioperl-l] Possible bug in Bio::Tools::SeqStats->get_mol_wt?   Chris Fields
    • [Bioperl-l] Possible bug in Bio::Tools::SeqStats->get_mol_wt?   Roy Chaudhuri
• [Bioperl-l] Genbank to gff3 format   Rachita Sharma
• [Bioperl-l] from SimpleAlign to SAM/BAM   Dan Bolser
• [Bioperl-l] Use of uninitialized value in length at Bio/DB/SeqFeature/Store/DBI/mysql.pm line 1062   Dan Bolser
  • [Bioperl-l] Use of uninitialized value in length at Bio/DB/SeqFeature/Store/DBI/mysql.pm line 1062   Jason Stajich
    • [Bioperl-l] Use of uninitialized value in length at Bio/DB/SeqFeature/Store/DBI/mysql.pm line 1062   Dan Bolser
      • [Bioperl-l] Use of uninitialized value in length at Bio/DB/SeqFeature/Store/DBI/mysql.pm line 1062   Roy Chaudhuri
      • [Bioperl-l] Use of uninitialized value in length at Bio/DB/SeqFeature/Store/DBI/mysql.pm line 1062   Chris Fields
      • [Bioperl-l] Use of uninitialized value in length at Bio/DB/SeqFeature/Store/DBI/mysql.pm line 1062   Dan Bolser
• [Bioperl-l] CDS complement statements from GenBank   Galeb Abu-Ali
  • [Bioperl-l] CDS complement statements from GenBank   Jason Stajich
    • [Bioperl-l] CDS complement statements from GenBank   Galeb Abu-Ali
• [Bioperl-l] Various bioperl build test errors   Drin
  • [Bioperl-l] Various bioperl build test errors   Chris Fields
• [Bioperl-l] install Bio::DB::BigWig ?   Dan Bolser
  • [Bioperl-l] install Bio::DB::BigWig ?   Dan Bolser
    • [Bioperl-l] install Bio::DB::BigWig ?   Dan Bolser
      • [Bioperl-l] install Bio::DB::BigWig ?   Chris Fields
  • [Bioperl-l] install Bio::DB::BigWig ?   Lincoln Stein
    • [Bioperl-l] install Bio::DB::BigWig ?   Dan Bolser
      • [Bioperl-l] install Bio::DB::BigWig ?   Lincoln Stein
• [Bioperl-l] Bioperl installation doubt   Dave Messina
  • [Bioperl-l] Bioperl installation doubt   ¶•●๋•இரவிяανι●๋••¶
    • [Bioperl-l] Bioperl installation doubt   Chris Fields
• [Bioperl-l] Bioperl installation doubt   Dave Messina
  • [Bioperl-l] Bioperl installation doubt   Chris Fields
    • [Bioperl-l] Bioperl installation doubt   Brian Osborne
      • [Bioperl-l] Bioperl installation doubt   Chris Fields
• [Bioperl-l] Bioperl installation doubt   Dave Messina
• [Bioperl-l] GuessSeqFormat GFF vs VCF   Dan Kortschak
• [Bioperl-l] How to use module Bio::SeqFeature::Gene::GeneStructure?   Tao Zhu
• [Bioperl-l] Announcing OBF Summer of Code - please forward!   Robert Buels
• [Bioperl-l] Newbie alert: Aligning and printing first position   Diego M. Vadell
  • [Bioperl-l] Newbie alert: Aligning and printing first position   Roy Chaudhuri
    • [Bioperl-l] Newbie alert: Aligning and printing first position   Diego M. Vadell
• [Bioperl-l] Difficulty downloading biosql schema   Josh Earl
  • [Bioperl-l] Difficulty downloading biosql schema   Hilmar Lapp
  • [Bioperl-l] Difficulty downloading biosql schema   Chris Fields
  • [Bioperl-l] Difficulty downloading biosql schema   Peter Cock
• [Bioperl-l] Tools::HMM in bioperl 1.6.1   suy
  • [Bioperl-l] Tools::HMM in bioperl 1.6.1   Chris Fields
  • [Bioperl-l] Tools::HMM in bioperl 1.6.1   Dave Messina
  • [Bioperl-l] Tools::HMM in bioperl 1.6.1   Kevin Brown
• [Bioperl-l] blast best hit   boyang zhe
  • [Bioperl-l] blast best hit   Brian Osborne
    • [Bioperl-l] blast best hit   Jordi Durban
  • [Bioperl-l] blast best hit   Frank Schwach
• [Bioperl-l] blast best hit   Frank Schwach
• [Bioperl-l] Old docs cleanup (was Re: Bioperl installation doubt)   Dave Messina
  • [Bioperl-l] Old docs cleanup (was Re: Bioperl installation doubt)   Chris Fields
• [Bioperl-l] How to specify color for each feature in a track?   Zhenguo Zhang
• [Bioperl-l] Reminder: GSoC proposals due in 1 week   Robert Buels
• [Bioperl-l] GSoC call for mentors   Robert Buels
• [Bioperl-l] FW: How to specify color for each feature in a track?   Zhenguo Zhang
• [Bioperl-l] git help   Scott Cain
  • [Bioperl-l] git help   Scott Cain
    • [Bioperl-l] git help   Chris Fields
    • [Bioperl-l] git help   Chris Fields
• [Bioperl-l] BEDTools.pm update   Dan Kortschak
  • [Bioperl-l] BEDTools.pm update   Chris Fields
• [Bioperl-l] StandAloneBlastPlus Question   Veronica A.

Last message date: Thu Mar 31 20:47:49 EDT 2011
Archived on: Fri Apr 1 17:29:38 EDT 2011

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