[Bioperl-l] Modules to read MEGA output and reproduce the phylogenetic tree

Dejian Zhao dejian.zhao at gmail.com
Wed Nov 2 21:39:22 EDT 2011

That's great!
Many thanks, Roy.

On 2011-11-2 21:49, Roy Chaudhuri wrote:
> MEGA can export trees in Newick format, which can be read by 
> Bio::TreeIO. The tree can be drawn in EPS format using 
> Bio::Tree::Draw::Cladogram. See:
> http://www.bioperl.org/wiki/HOWTO:Trees
> Roy.
> On 02/11/2011 13:33, Dejian Zhao wrote:
>> There are various packages on CPAN to cope with phylogenetic analysis. I
>> wonder which module can read the output from other phylogenetic
>> softwares, e.g. MEGA, and reproduce the phylogenetic tree. I want to
>> produce a picture which combines the phylogenetic tree and the structure
>> of each gene.
>> _______________________________________________
>> Bioperl-l mailing list
>> Bioperl-l at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/bioperl-l

More information about the Bioperl-l mailing list