[Bioperl-l] OBDA redux? Compressed files

Peter Cock p.j.a.cock at googlemail.com
Sun Nov 13 07:32:12 EST 2011


On Sun, Nov 13, 2011 at 12:30 PM, Peter Cock <p.j.a.cock at googlemail.com> wrote:
> Hi again,
>
> I've retitled this as it is a little off topic from the main OBDA redux thread,
> http://lists.open-bio.org/pipermail/open-bio-l/2011-November/000819.html
> http://lists.open-bio.org/pipermail/open-bio-l/2011-November/000820.html
> http://lists.open-bio.org/pipermail/open-bio-l/2011-November/000821.html
>
> As far as I recall, the original flat file and BDB based OBDA
> specification for indexing sequencing files didn't cover
> compressed files. That might be something to consider
> (although we should sort of uncompressed text/binary
> files first).

Sorry - didn't meant to include bioperl-l on that, although it may be
of interest to you guys anyway.

Peter


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