[Bioperl-l] Installation problem

Fields, Christopher J cjfields at illinois.edu
Wed Oct 12 15:41:05 EDT 2011


Possibly, though hard to say unless you give it a try.  It does have a lot of bug fixes though.

chris

On Oct 12, 2011, at 2:38 PM, Rajasimha, Harsha (NIH/NEI) [C] wrote:

> No Christopher, I am trying the latest stable version 1.6.1
> Should I expect a smoother install with 1.6.901?
> 
> Harsha
> 
> ________________________________________
> From: Fields, Christopher J [cjfields at illinois.edu]
> Sent: Wednesday, October 12, 2011 3:37 PM
> To: Rajasimha, Harsha (NIH/NEI) [C]
> Cc: bioperl-l at bioperl.org
> Subject: Re: [Bioperl-l] Installation problem
> 
> Have you tried the latest version from CPAN (v1.6.901)?
> 
> chris
> 
> On Oct 12, 2011, at 11:07 AM, Rajasimha, Harsha (NIH/NEI) [C] wrote:
> 
>> I am trying to install Bioperl since yesterday without any luck.
>> I have tried exact same instructions for multiple ways of installing from the bioperl wiki - but no luck.
>> I am attaching errors encountered during one such attempt below. Please help.
>> 
>> root at comp1z BioPerl-1.6.1]# perl Build.PL
>> This package requires Module::Build v0.2805 or greater to install itself.
>> Base class package "Module::Build" is empty.
>>   (Perhaps you need to 'use' the module which defines that package first.)
>> at (eval 2) line 1
>> BEGIN failed--compilation aborted at (eval 2) line 1.
>> BEGIN failed--compilation aborted at Bio/Root/Build.pm line 83.
>> Compilation failed in require at Build.PL line 14.
>> BEGIN failed--compilation aborted at Build.PL line 14.
>> 
>> I have tried installing Module::Build using CPAN, but that installation fails too due to dependencies (even though I say "yes" to all prepend dependencies questions during install).
>> 
>> Please help!!!
>> Harsha
>> National Eye Institute, Bethesda, MD
>> 301-402-5734
>> _______________________________________________
>> Bioperl-l mailing list
>> Bioperl-l at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/bioperl-l
> 




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