[Bioperl-l] genbank parsing of multiple 'function' tags within primary tag

galeb abu-ali abualiga2 at gmail.com
Thu Sep 8 11:55:08 EDT 2011


So are your intending to look at all the CDS features only, and
build a hash using the locus_tag as the key, and a list of the
'function' qualifiers as values?


Precisely!
I want to create a tab delim file with 'locus_tag' as the common identifier
to all the features and gene sequences. So far, I parsed out sequences and
single instance qualifiers, but 'function' and 'db_xref' qualifiers give me
grief.

galeb


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