[Bioperl-l] no blast result

Frank Schwach fs5 at sanger.ac.uk
Mon Sep 12 09:54:21 EDT 2011

looks like BLAST is not install on your system. The BioPerl module only
runs BLAST for you and parses the output but you still need the BLAST
executables installed on your system. Follow the instructions on the
NCBI website to download and install BLAST and try running it on the
commandline with the "blastall" command. If that works then you can run
it also via BioPerl.

On Mon, 2011-09-12 at 07:12 -0400, Manju Rawat wrote:
> I read this..but default program is not runnig fine.it showing many error
> that
> MSG: cannot find path to blastall..
> Use of uninitialized value $_[0] in join or string at
> /usr/share/perl/5.10/File/Spec/Unix.pm line 41.
> Am this this is not showing output which i want..
> Pl help me..
> Manju Rawat
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l

 The Wellcome Trust Sanger Institute is operated by Genome Research 
 Limited, a charity registered in England with number 1021457 and a 
 company registered in England with number 2742969, whose registered 
 office is 215 Euston Road, London, NW1 2BE. 

More information about the Bioperl-l mailing list