[Bioperl-l] how to blast a seq against multiple dbase

Manju Rawat manju.rawat2 at gmail.com
Wed Sep 28 05:54:07 EDT 2011


I have downloaded all the chromosome of Bos Taurus and i'd changed them in
blast format using makeblastdb..and now i want to localy blast my sequence
against these all chromosome..
now i have 29 database.Is there any method by which can i blast my sequence
against all 29 database in my program..

whta should i write in database????

@params = ('database' => '????????', 'outfile' => 'blast2.out',
        '_READMETHOD' => 'Blast', 'prog'=> 'blastn');

Manju Rawat

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