February 2012 Archives by thread

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Starting: Wed Feb 1 09:32:19 EST 2012
Ending: Wed Feb 29 21:42:06 EST 2012
Messages: 156

• [Bioperl-l] Running into problems   Bradyjoel
• [Bioperl-l] Running into problems   Bradyjoel
• [Bioperl-l] Running into problems   Bradyjoel
  • [Bioperl-l] Running into problems   Fields, Christopher J
    • [Bioperl-l] Running into problems   Bradyjoel
      • [Bioperl-l] Running into problems   Fields, Christopher J
  • [Bioperl-l] Running into problems   Smithies, Russell
    • [Bioperl-l] Running into problems   Bradyjoel
• [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Vivek Krishnakumar
  • [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Lincoln Stein
    • [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Vivek Krishnakumar
      • [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Scott Cain
      • [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Vivek Krishnakumar
      • [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Vivek Krishnakumar
      • [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Lincoln Stein
      • [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Vivek Krishnakumar
      • [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Scott Cain
      • [Bioperl-l] `get_feature_by_name` not working after migrating to Bio::DB::SeqFeature::Store from a Bio::DB::GFF backend   Scott Cain
• [Bioperl-l] Lineage from GB files   Adlai Burman
• [Bioperl-l] Check out my photos on Facebook   Puneet Kadimi
• [Bioperl-l] Check out my photos on Facebook   Puneet Kadimi
• [Bioperl-l] Only 10 days left to register for DAS Workshop 2012   Jonathan Warren
• [Bioperl-l] Bioperl parsing output file   DANIEL EDUARDO TORRENTE QUINTERO
  • [Bioperl-l] Bioperl parsing output file   Heikki Lehvaslaiho
• [Bioperl-l] Embedding hyperlinks in SVG files   Em Rich
  • [Bioperl-l] Embedding hyperlinks in SVG files   Scott Cain
• [Bioperl-l] help!   Casandra
  • [Bioperl-l] help!   Scott Cain
    • [Bioperl-l] help!   Chris Fields
      • [Bioperl-l] help!   Scott Cain
      • [Bioperl-l] help!   Chris Fields
      • [Bioperl-l] help!   Dave Messina
      • [Bioperl-l] help!   casandra
      • [Bioperl-l] help!   Warren W. Kretzschmar
      • [Bioperl-l] help!   Dave Messina
      • [Bioperl-l] help!   casandra
      • [Bioperl-l] help!   Chris Fields
      • [Bioperl-l] help!   Dave Messina
      • [Bioperl-l] help!   Fields, Christopher J
  • [Bioperl-l] help!   Joseph Guhlin
• [Bioperl-l] Question on seqfeature mapping   florian lajus
  • [Bioperl-l] Question on seqfeature mapping   Hilmar Lapp
    • [Bioperl-l] Question on seqfeature mapping   Lajus Florian
      • [Bioperl-l] Question on seqfeature mapping   Lajus Florian
      • [Bioperl-l] Question on seqfeature mapping   Hilmar Lapp
      • [Bioperl-l] Question on seqfeature mapping   Lajus Florian
• [Bioperl-l] Memory leak in Bio::SeqIO::staden::read->staden_read_trace() ?   Adam Sjøgren
• [Bioperl-l] bioperl-guts filtering   Fields, Christopher J
  • [Bioperl-l] bioperl-guts filtering   Dave Messina
• [Bioperl-l] parsing swissprot using SeqIO::swiss   Amin Momin
  • [Bioperl-l] parsing swissprot using SeqIO::swiss   Brian Osborne
• [Bioperl-l] blast2sam   Albert Vilella
• [Bioperl-l] call for project ideas - Google Summer of Code   Robert Buels
• [Bioperl-l] downloading 16s from NCBI   shalabh sharma
  • [Bioperl-l] downloading 16s from NCBI   Florent Angly
    • [Bioperl-l] downloading 16s from NCBI   Thomas Sharpton
• [Bioperl-l] Fwd: Interested in Variation?   Dan Bolser
• [Bioperl-l] Bio::SearchIO::XML::BlastHandler problems   Rondon Neto
• [Bioperl-l] Bio::SearchIO::XML::BlastHandler problems   Rondon Neto
  • [Bioperl-l] Bio::SearchIO::XML::BlastHandler problems   Fields, Christopher J
    • [Bioperl-l] unninstall Bioperl   Rondon Neto
      • [Bioperl-l] unninstall Bioperl   Leon Timmermans
      • [Bioperl-l] unninstall Bioperl   Fields, Christopher J
• [Bioperl-l] Query regarding retrieval sequences   tarakaramji M
• [Bioperl-l] YAPC::NA & BioPerl   JT Smith
  • [Bioperl-l] YAPC::NA & BioPerl   Leon Timmermans
    • [Bioperl-l] YAPC::NA & BioPerl   Hilmar Lapp
      • [Bioperl-l] YAPC::NA & BioPerl   Fields, Christopher J
      • [Bioperl-l] YAPC::NA & BioPerl   Fields, Christopher J
• [Bioperl-l] YAPC::NA & BioPerl   David Mertens
  • [Bioperl-l] YAPC::NA & BioPerl   JT Smith
• [Bioperl-l] Fwd: [Bioperl-guts-l] [BioPerl - Bug #3328] (New) segregating sites calculation fails on gapped sequences   Jason Stajich
• [Bioperl-l] Fwd: [Utilities-announce] NCBI E-Utilities Update   Peter Cock
  • [Bioperl-l] Fwd: [Utilities-announce] NCBI E-Utilities Update   Fields, Christopher J
• [Bioperl-l] Can't get bioperl to install   Joshua Levine
  • [Bioperl-l] Can't get bioperl to install   Fields, Christopher J
• [Bioperl-l] Search for sequence inside sequence   Carnë Draug
  • [Bioperl-l] Search for sequence inside sequence   Kevin Brown
    • [Bioperl-l] Search for sequence inside sequence   Fields, Christopher J
      • [Bioperl-l] Search for sequence inside sequence   Carnë Draug
• [Bioperl-l] BLAST example doesn't work   Enzyme
  • [Bioperl-l] BLAST example doesn't work   Frank Schwach
• [Bioperl-l] Fasta sequence width question   Francisco J. Ossandón
  • [Bioperl-l] Fasta sequence width question   Brian Osborne
    • [Bioperl-l] Fasta sequence width question   Francisco J. Ossandón
      • [Bioperl-l] Fasta sequence width question   Brian Osborne
      • [Bioperl-l] Fasta sequence width question   Chris Fields
• [Bioperl-l] Problem with Bio::GeneMapper   Sami Kilpinen
• [Bioperl-l] Navigating a genbank file   Adlai Burman
  • [Bioperl-l] Navigating a genbank file   Jason Stajich
    • [Bioperl-l] Navigating a genbank file   Adlai Burman
• [Bioperl-l] fetching all alignments from a sam/bam by read header in perl   Abhishek Pratap
  • [Bioperl-l] fetching all alignments from a sam/bam by read header in perl   Peter Cock
    • [Bioperl-l] fetching all alignments from a sam/bam by read header in perl   Abhishek Pratap
      • [Bioperl-l] fetching all alignments from a sam/bam by read header in perl   Abhishek Pratap
      • [Bioperl-l] fetching all alignments from a sam/bam by read header in perl   Joel Martin
• [Bioperl-l] Bioperl-l Digest, Vol 106, Issue 18   Michael Coyne
• [Bioperl-l] Can't locate object method "seq" via package "Bio::DB::Query::GenBank"   Brian Osborne
  • [Bioperl-l] Can't locate object method "seq" via package "Bio::DB::Query::GenBank"   Casandra
• [Bioperl-l] BLAST in Bioperl - Can't call method "next_result"   Casandra
• [Bioperl-l] Odd problem with get_tag_values   Adlai Burman
  • [Bioperl-l] Odd problem with get_tag_values   Brian Osborne
  • [Bioperl-l] Odd problem with get_tag_values   Jason Stajich
    • [Bioperl-l] Odd problem with get_tag_values   Adlai Burman
      • [Bioperl-l] Odd problem with get_tag_values   Fields, Christopher J
      • [Bioperl-l] Odd problem with get_tag_values   Adlai Burman
      • [Bioperl-l] Odd problem with get_tag_values   Roy Chaudhuri
    • [Bioperl-l] Odd problem with get_tag_values   Adlai Burman
      • [Bioperl-l] Odd problem with get_tag_values   Fields, Christopher J
      • [Bioperl-l] Odd problem with get_tag_values   Adlai Burman
      • [Bioperl-l] Odd problem with get_tag_values   Fields, Christopher J
      • [Bioperl-l] Odd problem with get_tag_values   Francisco J. Ossandón
  • [Bioperl-l] Odd problem with get_tag_values   Fields, Christopher J
• [Bioperl-l] Odd problem with get_tag_values   Adlai Burman
• [Bioperl-l] Odd problem with get_tag_values   Adlai Burman
• [Bioperl-l] extract sequences and save into files by genes   yang liu
• [Bioperl-l] Fate of Bio::Tools::PCRSimulation   Florent Angly
  • [Bioperl-l] Fate of Bio::Tools::PCRSimulation   Frank Schwach
  • [Bioperl-l] Fate of Bio::Tools::PCRSimulation   Fields, Christopher J
    • [Bioperl-l] Fate of Bio::Tools::PCRSimulation   Roy Chaudhuri
• [Bioperl-l] extract sequences and save into files by genes   Cook, Malcolm
• [Bioperl-l] Update: call for Google Summer of Code project ideas   Robert Buels
• [Bioperl-l] gerp++   kajendiran mahendiran
• [Bioperl-l] extract sequences and save into files by genes   Cook, Malcolm
• [Bioperl-l] fastq splitter   Sean O'Keeffe
  • [Bioperl-l] fastq splitter   Michael Muratet
    • [Bioperl-l] fastq splitter   Florent Angly
      • [Bioperl-l] fastq splitter   Fields, Christopher J
      • [Bioperl-l] fastq splitter   Peter Cock
      • [Bioperl-l] fastq splitter   Fields, Christopher J
      • [Bioperl-l] fastq splitter   Peter Cock
      • [Bioperl-l] fastq splitter   Fields, Christopher J
  • [Bioperl-l] fastq splitter   Fields, Christopher J
    • [Bioperl-l] fastq splitter   Sean O'Keeffe
      • [Bioperl-l] fastq splitter   Michael Muratet
      • [Bioperl-l] fastq splitter   Fields, Christopher J
  • [Bioperl-l] fastq splitter   Fields, Christopher J
    • [Bioperl-l] fastq splitter   Sean O'Keeffe
      • [Bioperl-l] fastq splitter   Thomas Sharpton
      • [Bioperl-l] fastq splitter   Fields, Christopher J
      • [Bioperl-l] fastq splitter   George Hartzell
• [Bioperl-l] fastq splitter   Fields, Christopher J
  • [Bioperl-l] fastq splitter   Sean O'Keeffe
    • [Bioperl-l] fastq splitter   Sean O'Keeffe
• [Bioperl-l] fastq splitter   Fields, Christopher J
  • [Bioperl-l] fastq splitter   Sean O'Keeffe
    • [Bioperl-l] fastq splitter   Peter Cock
      • [Bioperl-l] fastq splitter   Sean O'Keeffe
      • [Bioperl-l] fastq splitter   Scott Markel
    • [Bioperl-l] fastq splitter   Fields, Christopher J
• [Bioperl-l] Fate of Bio::Tools::PCRSimulation   Fields, Christopher J
• [Bioperl-l] fastq splitter   Peter Cock
• [Bioperl-l] fastq splitter   Fields, Christopher J
• [Bioperl-l] Fate of Bio::Tools::PCRSimulation   Fields, Christopher J
  • [Bioperl-l] Fate of Bio::Tools::PCRSimulation   Fields, Christopher J

Last message date: Wed Feb 29 21:42:06 EST 2012
Archived on: Wed Feb 29 21:42:11 EST 2012

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