[Bioperl-l] BioPerl and Travis-CI

Fields, Christopher J cjfields at illinois.edu
Fri Jul 27 10:58:21 EDT 2012


On Jul 27, 2012, at 9:47 AM, Peter Cock wrote:

> On Thu, Jul 26, 2012 at 4:22 PM, Peter Cock <p.j.a.cock at googlemail.com> wrote:
>> 
>> That's done now - except for the circular dependencies, and GD,
>> which might be easy to solve if anyone knows what the error
>> means - see commit message here:
>> https://github.com/peterjc/bioperl-live/commit/905441ac09939be3368c14de38d04486c7e9849a
> 
> Re: https://twitter.com/cjfields/status/228861370454638592
> Not sure why you got GD to work when something very similar
> had failed for me. Oh well - job done :)

It was the lack of gdlib-config in the libgd2-xpm package, you need libgd2-xpm-dev.  One of the fun things about Debian packaging.

>> Would a single clean commit of the (current) .travis.yml file be
>> preferable to the current series of commits? And you you want
>> a pull request, or would you just merge/cherry-pick manually?
> 
> Given all the churn between our revisions, personally I'd opt for
> a single clean commit to bioperl/master - but your call.
> 
> Peter

Yep, about to merge it over.  It's working now, just need to whitelist master instead of travis after the merge.

chris




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