[Bioperl-l] Filtering blast results. Was "Re: Using PEIMAP"

Dan Bolser dan.bolser at gmail.com
Fri Mar 30 08:37:13 EDT 2012


Cheers Joseph,

I'd recommend using BioPerl (CC'ed) or similar to process your blast results.


All the best,
Dan.

On 29 March 2012 08:40, Joseph Muldoon <jjm3bn at virginia.edu> wrote:
> Hi Dan,
>
> Thank you for your help. I built the index and am now able to use the PEIMAP
> database in a BLASTP search. Would you know how I could filter the alignment
> by minimum sequence identity or length coverage? If not, is there anyone you
> know who might be able to help?
> Thank you again.
>
> Joseph

>>>
>>> Joseph Muldoon
>>> University of Virginia
>
>



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