[Bioperl-l] to retrieve Upstream and downstream genes -Reg
carandraug+dev at gmail.com
Wed May 2 10:20:49 EDT 2012
On 2 May 2012 14:14, tarakaramji M <tarakaramji at gmail.com> wrote:
> Dear all,
> I am new to use bioperl modules. Could please guide me retrieving the
> upstream and downstream genes of a operon if a set of sequences or
> Accession numbers are given.
> Thanks in advance
Look into the bp_genbank_ref_extractor script (which is already in
). You can configure how much downstream and upstream base pairs to
get, just read the documentation.
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