[Bioperl-l] Update of SeqIO:: fastq Module for PacBio

Peter Cock p.j.a.cock at googlemail.com
Tue Oct 9 04:29:56 EDT 2012


On Mon, Oct 8, 2012 at 6:45 PM, Dan Nasko <dan.nasko at gmail.com> wrote:
> Peter,
>
> One of the folks at PacBio got back to me this weekend saying
> that the FASTQ encoding bug will be fixed in an upcoming software
> release.
>
> When I asked him how they were fixing it he said "The QVs are now
> being clipped at 89." Needless to say I'm extremely skeptical of these
> quality values.

Me too - but great to hear they're fixing their FASTQ :)

Thanks!

Peter


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