GLEAN

GLEAN is a gene predictor combiner tool used to generate a single set of gene predictions from a collection of predictions. It uses the LCA for the statistics of choosing the best set of gene features based on available splice-site, start, and stop codons. The software is freely available at the Glean-Gene sourceforge site.

It has been used in the Honeybee genome[1], Coprinus (mushroom), EGASP GenomeBiology issue, NGASP, and other genome annotation pipelines.

References

1. Elsik CG, Mackey AJ, Reese JT, Milshina NV, Roos DS, and Weinstock GM. Creating a honey bee consensus gene set. Genome Biol. 2007;8(1):R13. DOI:10.1186/gb-2007-8-1-r13 |