PROBCONS

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Probabilistic Consistency-based Multiple Alignment of Amino Acid Sequences is available here. PROBCONS is an efficient protein multiple sequence alignment program, which has demonstrated a statistically significant improvement in accuracy compared to several leading alignment tools.

References

  1. Do CB, Mahabhashyam MS, Brudno M, and Batzoglou S. ProbCons: Probabilistic consistency-based multiple sequence alignment. Genome Res 2005 Feb; 15(2) 330-40. doi:10.1101/gr.2821705 pmid:15687296. PubMed HubMed [probcons]
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