SLAM

From BioPerl

website

References

1. Dewey C, Wu JQ, Cawley S, Alexandersson M, Gibbs R, and Pachter L. Accurate identification of novel human genes through simultaneous gene prediction in human, mouse, and rat. Genome Res 2004 Apr; 14(4) 661-4. doi:10.1101/gr.1939804 pmid:15060007. PubMed HubMed [dewey]
2. Cawley S, Pachter L, and Alexandersson M. SLAM web server for comparative gene finding and alignment. Nucleic Acids Res 2003 Jul 1; 31(13) 3507-9. pmid:12824355. PubMed HubMed [calwey]
3. Alexandersson M, Cawley S, and Pachter L. SLAM: cross-species gene finding and alignment with a generalized pair hidden Markov model. Genome Res 2003 Mar; 13(3) 496-502. doi:10.1101/gr.424203 pmid:12618381. PubMed HubMed [slam]

All Medline abstracts: PubMed HubMed