- Korf I, Flicek P, Duan D, and Brent MR. Integrating genomic homology into gene structure prediction. Bioinformatics. 2001;17 Suppl 1:S140-8.
- Flicek P, Keibler E, Hu P, Korf I, and Brent MR. Leveraging the mouse genome for gene prediction in human: from whole-genome shotgun reads to a global synteny map. Genome Res. 2003 Jan;13(1):46-54. DOI:10.1101/gr.830003 |
- Wang M, Buhler J, and Brent MR. The effects of evolutionary distance on TWINSCAN, an algorithm for pair-wise comparative gene prediction. Cold Spring Harb Symp Quant Biol. 2003;68:125-30.
- Tenney AE, Brown RH, Vaske C, Lodge JK, Doering TL, and Brent MR. Gene prediction and verification in a compact genome with numerous small introns. Genome Res. 2004 Nov;14(11):2330-5. DOI:10.1101/gr.2816704 |