BLASTN 2.0.11 [Jan-20-2000] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= U51677 (2575 letters) Database: embl.fas 442,729 sequences; 675,252,082 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value U51677 Human non-histone chromatin protein HMG1 (HMG1) gene, co... 4129 0.0 L38477 Mus musculus (clone Clebp-1) high mobility group 1 prote... 353 7e-95 X80457 M.musculus HMG1 gene 353 7e-95 U00431 Mus musculus HMG-1 mRNA, complete cds. 353 7e-95 L08048 Human non-histone chromosomal protein (HMG-1) retropseud... 349 1e-93 X12597 Human mRNA for high mobility group-1 protein (HMG-1). 349 1e-93 M64986 Rat amphoterin mRNA, complete cds. 345 2e-92 Z11997 M.musculus mRNA for non-histone chromosomal high-mobilit... 345 2e-92 D63874 Human mRNA for HMG-1, complete cds. 345 2e-92 Z95115 Human DNA sequence from BAC 445C9 on chromosome 22q12.1. 337 4e-90 X12796 Bovine mRNA for high mobility group 1 (HMG1) protein 335 2e-89 M26110 Bovine high-mobility-group protein (HMG-1) mRNA, 3' end. 327 4e-87 AF009343 Mus musculus HMG-like protein (Trf) mRNA, complete cds. 305 2e-80 M21683;M21684 Pig nonhistone protein HMG1 mRNA, complete cds. 303 6e-80 L13805 Homo sapiens (clone 06) high mobility group 1 protein mRNA 260 8e-67 D14718 Human chromosomal protein HMG1 related gene. 252 2e-64 Y00365 Chinese hamster HMG-1 gene for high mobility group prote... 246 1e-62 M63852 Rat high mobility group 1 protein synthetic gene, comple... 226 1e-56 Y00463 Rat mRNA for high mobility group protein HMG1 226 1e-56 X80466 M.musculus HMG1-R-227 gene 210 7e-52 X80462 M.musculus HMG1-R-154 gene 184 4e-44 X80461 M.musculus HMG1-R-145 gene 147 8e-33 X80459 M.musculus HMG1-R-177 gene 133 1e-28 X80467 M.musculus HMG1-R-87 gene 133 1e-28 X80465 M.musculus HMG1-R-168 gene 133 1e-28 X80463 M.musculus HMG1-R-159 gene 131 5e-28 L32859 Rainbow trout HMG-1 gene exons 2-5, complete cds. 127 8e-27 X80460 M.musculus HMG1-R-135 gene 127 8e-27 X80464 M.musculus HMG1-R-161 gene 125 3e-26 X02666 Trout mRNA for high mobility group protein HMG-T 117 7e-24 U21933 Xenopus laevis high mobility group protein-1 (HMG-1) mRN... 107 7e-21 I14731 Sequence 10 from patent US 5451670. 92 4e-16 X63463 G.gallus HMG2a mRNA 90 2e-15 Z29356 Gallus domesticus of h71t7 gene encoding G.domesticus ex... 82 4e-13 D84418 Rat mRNA for chromosomal protein HMG2, complete cds. 78 6e-12 Z46757 M.musculus mRNA for high mobility group 2 protein. 78 6e-12 U31513 Ambystoma mexicanum high mobility group protein-2 (HMG-2... 76 3e-11 D14314 Chicken mRNA for HMG-1, complete cds. 70 2e-09 Z17240 Homo sapiens for mRNA encoding HMG2B. 70 2e-09 M83665 Human high mobility group 2 protein (HMG-2) gene, comple... 70 2e-09 X62534 H.sapiens HMG-2 mRNA 70 2e-09 X98857 L.fluviatilis mRNA for HMG protein 68 6e-09 X67668 M.musculus mRNA for high mobility group 2 protein 62 4e-07 J02895 Pig non-histone chromosomal protein (HMG2) mRNA, complet... 62 4e-07 D30765 Xenopus laevis mRNA for HMG-X protein, complete cds. 60 2e-06 L32954 Rainbow trout HMG-T2 gene exons 1-4, complete cds. 54 9e-05 M83235 Gallus gallus non-histone chromosomal protein (HMG2) mRN... 52 4e-04 AF003626 Homo sapiens cosmids IM0525, LC1233, Qc3C1, LB1439, Qc... 50 0.001 M80574 Gallus domesticus high-mobility group-2 protein (HMG-2) ... 46 0.023 X80869 P.citri gene for cytochrome oxidase subunit I 46 0.023 AF022465 Mus musculus high mobility group protein homolog HMG4 ... 44 0.090 AC002510 Arabidopsis thaliana chromosome II BAC T32G6 genomic s... 44 0.090 AB009838 Loligo bleekeri mitochondrial DNA, complete sequence. 44 0.090 Y10043 Homo sapiens mRNA for high mobility group protein HMG2a 44 0.090 AC004008 Human PAC clone DJ0899B21 from 7p15-p21, complete sequ... 42 0.36 AE001182;AE000783 Borrelia burgdorferi (section 68 of 70) of th... 40 1.4 AE000963;AE000782 Archaeoglobus fulgidus section 144 of 172 of ... 40 1.4 U60491 Nicotiana tabacum actin (Tob66) gene, partial cds. 40 1.4 AB001684 Chlorella vulgaris C-27 chloroplast DNA, complete sequ... 40 1.4 Z50742 Caenorhabditis elegans cosmid K09A11 40 1.4 X64643 H.sapiens c6.1A mRNA 40 1.4 Z83838 Human DNA sequence from PAC 127B20 on chromosome 22q11.2... 40 1.4 L77118 Methanococcus jannaschii large extra-chromosomal element... 38 5.5 L08814 Rat CIIDBP (homologous to human SSRP-1 and mouse T160 ge... 38 5.5 M18222;J03590 Mouse CD3-delta (T3-delta) gene, 5' end; and CD3-... 38 5.5 X95600 M.musculus mRNA for cadherin-8 38 5.5 AB010437 Rattus rattus rCdh8-a1 mRNA for cadherin-8, complete cds. 38 5.5 AB010436 Rattus rattus rCdh8 mRNA for cadherin-8, complete cds. 38 5.5 AL021633 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16... 38 5.5 I55098 Sequence 53 from patent US 5646250. 38 5.5 I55093 Sequence 43 from patent US 5646250. 38 5.5 I55092 Sequence 41 from patent US 5646250. 38 5.5 I46829 Sequence 47 from patent US 5639634. 38 5.5 I34431 Sequence 53 from patent US 5597725. 38 5.5 I34426 Sequence 43 from patent US 5597725. 38 5.5 I34425 Sequence 41 from patent US 5597725. 38 5.5 Z47547 C.crispus complete mitochondrial genome. 38 5.5 Z46224 C.crispus Mitochondrion gene for large subunit ribosomal... 38 5.5 U84139 Bos taurus structure-specific recognition protein 1 (SSR... 38 5.5 AL010134 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *... 38 5.5 Z99281 Caenorhabditis elegans cosmid Y57G11C 38 5.5 Z35597 Caenorhabditis elegans cosmid C36E8 38 5.5 AF003386 Caenorhabditis elegans cosmid F59E12. 38 5.5 Z30950 C.crispus mitochondrial gene for small subunit ribosomal... 38 5.5 AF026208 Caenorhabditis elegans cosmid F52D1. 38 5.5 Z69712 Human DNA sequence from cosmid N12G10, on chromosome 22q... 38 5.5 Z84495 Human DNA sequence from cosmid LUCA8 38 5.5 L81635 Homo sapiens (subclone 2_c11 from P1 H33) DNA sequence, ... 38 5.5 Z68754 Human DNA sequence from cosmid cE78H10, on chromosome 22... 38 5.5 L34060 Homo sapiens cadherin-8 mRNA, complete cds. 38 5.5 AC002378 Human PAC clone DJ438O4 from 22q12.1-qter, complete se... 38 5.5 AC002124 Human BAC clone RG180O01 from 7p15-p21, complete seque... 38 5.5 Z93931 Human DNA sequence from PAC 438G17 on chromosome 6q22. C... 38 5.5 AL008907 H.sapiens STS from genomic clone 404F18. 38 5.5 AC004130 Homo sapiens BAC clone RG293F17 from 7p15-p21, complet... 38 5.5 AC004000 Human PAC clone DJ404F18 from Xq23, complete sequence. 38 5.5 AC003683 Homo sapiens Xp22 PAC RPCI1-147H15 (Research Park PAC ... 38 5.5 AC003013 Human PAC clone DJ0205E24 from Xq23, complete sequence. 38 5.5 AC002556 Human Chromosome 11 pac pDJ9j14, complete sequence. 38 5.5 >U51677 Human non-histone chromatin protein HMG1 (HMG1) gene, complete cds. Length = 2575 Score = 4129 bits (2083), Expect = 0.0 Identities = 2167/2209 (98%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 Query: 121 ttttctaagaagtgctcagagaggtggaaggtaagagggcttaaaacatgctaacaaggt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttttctaagaagtgctcagagaggtggaaggtaagagggcttaaaacatgctaacaaggt 180 Query: 181 aattaaaagacagtttccaattgaggatgcnnnnnnnngcctagttggcattctcgtagt 240 |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 181 aattaaaagacagtttccaattgaggatgcaaaaaaaagcctagttggcattctcgtagt 240 Query: 241 gggacgctattacatagcaaaagacattggttttgaggataatttacttaaatgttacaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggacgctattacatagcaaaagacattggttttgaggataatttacttaaatgttacaa 300 Query: 301 cttaaacttacaaattaattattttgtagaccatgtctgctaaagagaaaggaaaatttg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cttaaacttacaaattaattattttgtagaccatgtctgctaaagagaaaggaaaatttg 360 Query: 361 aagatatggcaaaagcggacaaggcccgttatgaaagagaaatgaaaacctatatccctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aagatatggcaaaagcggacaaggcccgttatgaaagagaaatgaaaacctatatccctc 420 Query: 421 ccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccgtgag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccgtgag 480 Query: 481 tatcttgcctgtttttacttcccagacacgttttacagtagaatctgagagaaatttagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tatcttgcctgtttttacttcccagacacgttttacagtagaatctgagagaaatttagc 540 Query: 541 aagctactttgtcagtttagagtgtaaatgtacaatcaaagtttcttagctaatacttgt 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 aagctactttgtcagtttagagtgtaaatgtacaatcaaagtttcttagctaatacttgt 600 Query: 601 tcatattggttatatttaaatagtataaaattcctgttgggtgggagtgttcccagagca 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 tcatattggttatatttaaatagtataaaattcctgttgggtgggagtgttcccagagca 660 Query: 661 tttgaattagacatttggtctcctttgcccagtgtatctccttttgatctttttatttct 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 tttgaattagacatttggtctcctttgcccagtgtatctccttttgatctttttatttct 720 Query: 721 tgaaaaatactatccctttgaaatagtgtaattgtagaatgttcatctagggttctagct 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 tgaaaaatactatccctttgaaatagtgtaattgtagaatgttcatctagggttctagct 780 Query: 781 agtataaattaaatagttgtaaattaagctttggttgtgaaggatatttagtatattata 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 agtataaattaaatagttgtaaattaagctttggttgtgaaggatatttagtatattata 840 Query: 841 gtatttgcaccctgtccaatgcatcacagaaattcacaggcagctttaaatagcaatgca 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 gtatttgcaccctgtccaatgcatcacagaaattcacaggcagctttaaatagcaatgca 900 Query: 901 gtgtacacctgatagtatttgtttttgtgatctgttaacttaaaatcctaaaattaannn 960 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 gtgtacacctgatagtatttgtttttgtgatctgttaacttaaaatcctaaaattaattt 960 Query: 961 nnnnnnnagttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggaga 1020 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 tttttttagttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggaga 1020 Query: 1021 acatcctggcctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacac 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 acatcctggcctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacac 1080 Query: 1081 tgctgcagatgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacga 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 tgctgcagatgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacga 1140 Query: 1141 aaaggtaagaagtgtgggtttgcttggtaaaatgatgacaagtacgccagatgtatgatt 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 aaaggtaagaagtgtgggtttgcttggtaaaatgatgacaagtacgccagatgtatgatt 1200 Query: 1201 gtacttagtttgaggtgtaataagtttttagggtaacagctacattaagtatggtgttga 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 gtacttagtttgaggtgtaataagtttttagggtaacagctacattaagtatggtgttga 1260 Query: 1261 tataagtcctcatccttcaaagaatgcagaggaccaaataaattagggnnnnnnngacta 1320 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1261 tataagtcctcatccttcaaagaatgcagaggaccaaataaattagggtttttttgacta 1320 Query: 1321 aaatgtaatcagactcagacaaaggctgtgtacatttatgttggttttgttattccccag 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 aaatgtaatcagactcagacaaaggctgtgtacatttatgttggttttgttattccccag 1380 Query: 1381 tatcttgaagttcatgaaaatgttggtagtcacttcaagtcaaaaatgagcattttcaaa 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 tatcttgaagttcatgaaaatgttggtagtcacttcaagtcaaaaatgagcattttcaaa 1440 Query: 1441 tggcttggcatacagtacaaaaacaggctagacaaagtaatataggctatatttttctta 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 tggcttggcatacagtacaaaaacaggctagacaaagtaatataggctatatttttctta 1500 Query: 1501 gtcatatcctgaaacatttatgttcttttcctttagatactcaaaaaaccacagcatcac 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 gtcatatcctgaaacatttatgttcttttcctttagatactcaaaaaaccacagcatcac 1560 Query: 1561 taagttaaattacaagtctgctgctctgtccagtaaattaataagattaaggaaatctat 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 taagttaaattacaagtctgctgctctgtccagtaaattaataagattaaggaaatctat 1620 Query: 1621 aactcttatagttcagtaaattgaaatattaaatacttaattttcagctttagtcattct 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 aactcttatagttcagtaaattgaaatattaaatacttaattttcagctttagtcattct 1680 Query: 1681 gaaaagtgtttatttctagatgtttcttaacctaattgcatgtttattgacaaattaccn 1740 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 gaaaagtgtttatttctagatgtttcttaacctaattgcatgtttattgacaaattacct 1740 Query: 1741 nnnnnnnnnaagaccacatttcctactaaggattaaggtctgacagtgtaaacctgtaga 1800 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 tttttttttaagaccacatttcctactaaggattaaggtctgacagtgtaaacctgtaga 1800 Query: 1801 gtgcttttttgcattcagaaggtggcagtgtctaccctttaatcaaagtctctacattct 1860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 gtgcttttttgcattcagaaggtggcagtgtctaccctttaatcaaagtctctacattct 1860 Query: 1861 ggttttaatagagttaggatctggtagataattgcacctcaatgaggcataactttgcaa 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 ggttttaatagagttaggatctggtagataattgcacctcaatgaggcataactttgcaa 1920 Query: 1921 atattagactatgccatttcatgagttatagattgttataatgatcttgtatttttatgt 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 atattagactatgccatttcatgagttatagattgttataatgatcttgtatttttatgt 1980 Query: 1981 tcatttattgaagttctagttatttctggagttgctgtggatctacagatacgtgatatt 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 tcatttattgaagttctagttatttctggagttgctgtggatctacagatacgtgatatt 2040 Query: 2041 ttggtataactagaatcttgatttctttcataaagttctgccatgttctatttctttcct 2100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 ttggtataactagaatcttgatttctttcataaagttctgccatgttctatttctttcct 2100 Query: 2101 taatcnnnnnnncttccctactgttttatcctccctttgctttggaaggatattgctgca 2160 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2101 taatctttttttcttccctactgttttatcctccctttgctttggaaggatattgctgca 2160 Query: 2161 tatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaagg 2209 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2161 tatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaagg 2209 Score = 361 bits (182), Expect = 3e-97 Identities = 210/224 (93%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 2411 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagtt 2471 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 Query: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 >L38477 Mus musculus (clone Clebp-1) high mobility group 1 protein (HMG-1) Length = 1225 Score = 353 bits (178), Expect = 7e-95 Identities = 209/224 (93%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 746 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 805 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 806 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagtt 865 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 925 Query: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 926 aaccttgcctggtacagtctgggggttgtaaattggcatggaaa 969 Score = 234 bits (118), Expect = 5e-59 Identities = 142/150 (94%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 74 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg 133 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 134 caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag 193 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || |||||||||||||||||||||||| Sbjct: 194 ttctccaagaagtgctcagagaggtggaag 223 Score = 214 bits (108), Expect = 4e-53 Identities = 138/148 (93%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||| || || |||||||||||||||||||| || |||||||| | Sbjct: 222 agaccatgtctgctaaagaaaaggggaaatttgaagatatggcaaaggctgacaaggctc 281 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 282 gttatgaaagagaaatgaaaacctacatcccccccaaaggggagaccaaaaagaagttca 341 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||| ||||||||||||||||||||||| Sbjct: 342 aggaccccaatgcacccaagaggcctcc 369 Score = 186 bits (94), Expect = 1e-44 Identities = 145/162 (89%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||||||| | ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 370 ttcggccttcttcttgttctgttctgagtaccgccccaaaatcaaaggcgagcatcctgg 429 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 | | ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 430 cttatccattggtgatgttgcaaagaaactaggagagatgtggaacaacactgcagcaga 489 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaagga 1131 |||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 490 tgacaagcagccctatgagaagaaagctgccaagctgaagga 531 Score = 73.8 bits (37), Expect = 1e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2145 gaaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgt 2204 ||||||||||||||| || ||||||||||||| ||||||||||| |||||||| || || Sbjct: 541 gaaggatattgctgcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggt 600 Query: 2205 caagg 2209 ||||| Sbjct: 601 caagg 605 >X80457 M.musculus HMG1 gene Length = 2547 Score = 353 bits (178), Expect = 7e-95 Identities = 209/224 (93%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2202 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 2261 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2262 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagtt 2321 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2322 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2381 Query: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2382 aaccttgcctggtacagtctgggggttgtaaattggcatggaaa 2425 Score = 266 bits (134), Expect = 1e-68 Identities = 155/162 (95%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 173 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg 232 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 233 caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag 292 Query: 121 ttttctaagaagtgctcagagaggtggaaggtaagagggctt 162 ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 293 ttttccaagaagtgctcagagaggtggaaggtaagagggctt 334 Score = 232 bits (117), Expect = 2e-58 Identities = 147/157 (93%) Strand = Plus / Plus Query: 327 tagaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggcc 386 |||||||||||||||||||| || || |||||||||||||||||||| || |||||||| Sbjct: 467 tagaccatgtctgctaaagaaaaggggaaatttgaagatatggcaaaggctgacaaggct 526 Query: 387 cgttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttc 446 |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 527 cgttatgaaagagaaatgaaaacctacatcccccccaaaggggagaccaaaaagaagttc 586 Query: 447 aaggatcccaatgcacccaagaggcctccgtgagtat 483 ||||| ||||||||||||||||||||||||||||||| Sbjct: 587 aaggaccccaatgcacccaagaggcctccgtgagtat 623 Score = 194 bits (98), Expect = 4e-47 Identities = 161/182 (88%) Strand = Plus / Plus Query: 968 agttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcct 1027 ||||||||||||||| | ||||| |||||||| ||||| ||||||||||| || |||||| Sbjct: 1007 agttcggccttcttcttgttctgttctgagtaccgccccaaaatcaaaggcgagcatcct 1066 Query: 1028 ggcctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgca 1087 ||| | ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 1067 ggcttatccattggtgatgttgcaaagaaactaggagagatgtggaacaacactgcagca 1126 Query: 1088 gatgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaaggta 1147 |||||||||||||| ||||| ||||| ||||| ||||||||||| || || || |||||| Sbjct: 1127 gatgacaagcagccctatgagaagaaagctgccaagctgaaggagaagtatgagaaggta 1186 Query: 1148 ag 1149 || Sbjct: 1187 ag 1188 Score = 81.8 bits (41), Expect = 4e-13 Identities = 62/69 (89%) Strand = Plus / Plus Query: 2141 tttggaaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggag 2200 ||||||||||||||||||| || ||||||||||||| ||||||||||| |||||||| | Sbjct: 1992 tttggaaggatattgctgcctacagagctaaaggaaaacctgatgcagcgaaaaaggggg 2051 Query: 2201 ttgtcaagg 2209 | ||||||| Sbjct: 2052 tggtcaagg 2060 Score = 56.0 bits (28), Expect = 2e-05 Identities = 73/87 (83%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 1869 tagagttaggatctggtagataattgcacctcaatgaggcataactttgcaaatattaga 1928 |||| ||||||| ||||| |||||||||| ||| ||||||||||| |||||||||| Sbjct: 1777 tagaattaggatgtggtatataattgcacttcagtgaggcataacaacacaaatattag- 1835 Query: 1929 ctatgccatttcatgagttatagattg 1955 | || ||||||||||||| ||||||| Sbjct: 1836 -tctgacatttcatgagttgtagattg 1861 Score = 46.1 bits (23), Expect = 0.023 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1791 aacctgtagagtgcttttttgcattcagaaggtggcagt 1829 |||||||||| |||| ||||| |||||||||||||||| Sbjct: 1699 aacctgtagaatgctgttttgtgttcagaaggtggcagt 1737 >U00431 Mus musculus HMG-1 mRNA, complete cds. Length = 1308 Score = 353 bits (178), Expect = 7e-95 Identities = 209/224 (93%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 818 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 877 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 878 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagtt 937 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 997 Query: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 998 aaccttgcctggtacagtctgggggttgtaaattggcatggaaa 1041 Score = 234 bits (118), Expect = 5e-59 Identities = 142/150 (94%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 146 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg 205 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 206 caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag 265 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || |||||||||||||||||||||||| Sbjct: 266 ttctccaagaagtgctcagagaggtggaag 295 Score = 214 bits (108), Expect = 4e-53 Identities = 138/148 (93%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||| || || |||||||||||||||||||| || |||||||| | Sbjct: 294 agaccatgtctgctaaagaaaaggggaaatttgaagatatggcaaaggctgacaaggctc 353 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 354 gttatgaaagagaaatgaaaacctacatcccccccaaaggggagaccaaaaagaagttca 413 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||| ||||||||||||||||||||||| Sbjct: 414 aggaccccaatgcacccaagaggcctcc 441 Score = 186 bits (94), Expect = 1e-44 Identities = 145/162 (89%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||||||| | ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 442 ttcggccttcttcttgttctgttctgagtaccgccccaaaatcaaaggcgagcatcctgg 501 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 | | ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 502 cttatccattggtgatgttgcaaagaaactaggagagatgtggaacaacactgcagcaga 561 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaagga 1131 |||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 562 tgacaagcagccctatgagaagaaagctgccaagctgaagga 603 Score = 73.8 bits (37), Expect = 1e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2145 gaaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgt 2204 ||||||||||||||| || ||||||||||||| ||||||||||| |||||||| || || Sbjct: 613 gaaggatattgctgcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggt 672 Query: 2205 caagg 2209 ||||| Sbjct: 673 caagg 677 >L08048 Human non-histone chromosomal protein (HMG-1) retropseudogene. Length = 1814 Score = 349 bits (176), Expect = 1e-93 Identities = 176/176 (100%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1013 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1073 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1074 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1129 Score = 337 bits (170), Expect = 4e-90 Identities = 207/224 (92%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||| |||||| |||||||| || Sbjct: 1333 cttgtctataaagcatttaacccccctgtacacaattcactctttttaaagaaaaaaatt 1392 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1393 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagtt 1452 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1453 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 1512 Query: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1513 aactttgcctggtacagtatgggggttgtaaattggcatggaaa 1556 Score = 289 bits (146), Expect = 9e-76 Identities = 149/150 (99%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 658 atgggcaaaggagatcctaagaagccgacaggcaaaatgtcatcatatgcattttttgtg 717 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 777 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 |||||||||||||||||||||||||||||| Sbjct: 778 ttttctaagaagtgctcagagaggtggaag 807 Score = 278 bits (140), Expect = 3e-72 Identities = 143/144 (99%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 806 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaggcggacaaggccc 865 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 925 Query: 448 aggatcccaatgcacccaagaggc 471 |||||||||||||||||||||||| Sbjct: 926 aggatcccaatgcacccaagaggc 949 Score = 119 bits (60), Expect = 2e-24 Identities = 63/64 (98%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 2205 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1126 aaggatatagctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 1185 Query: 2206 aagg 2209 |||| Sbjct: 1186 aagg 1189 >X12597 Human mRNA for high mobility group-1 protein (HMG-1). Length = 1009 Score = 349 bits (176), Expect = 1e-93 Identities = 176/176 (100%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 408 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 468 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 524 Score = 347 bits (175), Expect = 4e-93 Identities = 210/225 (93%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactcc-ttttaaagnnnnnnnt 2410 ||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 727 cttgtctataaagcatttaacccccctgtacacaactcactcccttttaaagaaaaaaat 786 Query: 2411 tgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagt 2470 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 787 tgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagt 846 Query: 2471 taacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccac 2530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 taacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccac 906 Query: 2531 taaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 taaccttgcctggtacagtatgggggttgtaaattggcatggaaa 951 Score = 297 bits (150), Expect = 4e-78 Identities = 150/150 (100%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 112 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 172 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 |||||||||||||||||||||||||||||| Sbjct: 173 ttttctaagaagtgctcagagaggtggaag 202 Score = 293 bits (148), Expect = 6e-77 Identities = 148/148 (100%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 260 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 320 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||||||||||||||||||||||||||| Sbjct: 321 aggatcccaatgcacccaagaggcctcc 348 Score = 119 bits (60), Expect = 2e-24 Identities = 63/64 (98%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 2205 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 aaggatatagctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 580 Query: 2206 aagg 2209 |||| Sbjct: 581 aagg 584 >M64986 Rat amphoterin mRNA, complete cds. Length = 1225 Score = 345 bits (174), Expect = 2e-92 Identities = 208/224 (92%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 796 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 855 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 856 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagtt 915 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 916 aacacactaccgaatgtgtctttagctagccctgtcctggtggtattttcaatagccact 975 Query: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 976 aaccttgcctggtacagtctgggggttgtaaattggcatggaaa 1019 Score = 226 bits (114), Expect = 1e-56 Identities = 141/150 (94%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 123 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg 182 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 ||||| || ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 183 caaacctgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag 242 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || |||||||||||||||||||||||| Sbjct: 243 ttctccaagaagtgctcagagaggtggaag 272 Score = 210 bits (106), Expect = 7e-52 Identities = 148/162 (91%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||||||| | ||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 419 ttcggccttcttcttgttctgttctgagtaccgcccaaaaatcaaaggcgagcatcctgg 478 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 | | |||||||||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 479 cttatccattggtgatgttgcgaagaaactaggagagatgtggaacaacactgctgcgga 538 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaagga 1131 |||||||||||| |||||||||||||| || ||||||||||| Sbjct: 539 tgacaagcagccctatgaaaagaaggccgccaagctgaagga 580 Score = 206 bits (104), Expect = 1e-50 Identities = 137/148 (92%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||| || || |||||||||||||||||||| || |||||||| | Sbjct: 271 agaccatgtctgctaaagaaaaggggaaatttgaagatatggcaaaggctgacaaggctc 330 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 331 gttatgaaagagaaatgaaaacctacatcccccccaaaggggagaccaaaaagaagttca 390 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||| |||||||| |||||||||||||| Sbjct: 391 aggaccccaatgcccccaagaggcctcc 418 Score = 73.8 bits (37), Expect = 1e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2145 gaaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgt 2204 ||||||||||||||| || ||||||||||||| ||||||||||| |||||||| || || Sbjct: 590 gaaggatattgctgcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggt 649 Query: 2205 caagg 2209 ||||| Sbjct: 650 caagg 654 >Z11997 M.musculus mRNA for non-histone chromosomal high-mobility group 1 Length = 2231 Score = 345 bits (174), Expect = 2e-92 Identities = 208/224 (92%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 746 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 805 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 806 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttggatagtt 865 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 925 Query: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 926 aaccttgcctggtacagtctgggggttgtaaattggcatggaaa 969 Score = 242 bits (122), Expect = 2e-61 Identities = 143/150 (95%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 73 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg 132 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 133 caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag 192 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 ||||| |||||||||||||||||||||||| Sbjct: 193 ttttccaagaagtgctcagagaggtggaag 222 Score = 214 bits (108), Expect = 4e-53 Identities = 138/148 (93%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||| || || |||||||||||||||||||| || |||||||| | Sbjct: 221 agaccatgtctgctaaagaaaaggggaaatttgaagatatggcaaaggctgacaaggctc 280 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 281 gttatgaaagagaaatgaaaacctacatcccccccaaaggggagaccaaaaagaagttca 340 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||| ||||||||||||||||||||||| Sbjct: 341 aggaccccaatgcacccaagaggcctcc 368 Score = 186 bits (94), Expect = 1e-44 Identities = 145/162 (89%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||||||| | ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 369 ttcggccttcttcttgttctgttctgagtaccgccccaaaatcaaaggcgagcatcctgg 428 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 | | ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 429 cttatccattggtgatgttgcaaagaaactaggagagatgtggaacaacactgcagcaga 488 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaagga 1131 |||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 489 tgacaagcagccctatgagaagaaagctgccaagctgaagga 530 Score = 73.8 bits (37), Expect = 1e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2145 gaaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgt 2204 ||||||||||||||| || ||||||||||||| ||||||||||| |||||||| || || Sbjct: 540 gaaggatattgctgcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggt 599 Query: 2205 caagg 2209 ||||| Sbjct: 600 caagg 604 >D63874 Human mRNA for HMG-1, complete cds. Length = 1194 Score = 345 bits (174), Expect = 2e-92 Identities = 208/224 (92%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 751 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 810 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 811 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagtt 870 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 871 aacacactaccgaatgtgtctttagatagccctgtcctggtggtatcttcaatagccact 930 Query: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 931 aaccctgcctggtacagtatgggggttgtaaattggcatggaaa 974 Score = 333 bits (168), Expect = 7e-89 Identities = 174/176 (98%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 432 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 492 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 493 tgacaagcagccttatgaaaagaaggctgaaaagctgaaggaaaaatacgaaaagg 548 Score = 293 bits (148), Expect = 6e-77 Identities = 148/148 (100%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 284 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 344 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||||||||||||||||||||||||||| Sbjct: 345 aggatcccaatgcacccaagaggcctcc 372 Score = 281 bits (142), Expect = 2e-73 Identities = 148/150 (98%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 77 atgggcaaaggagatcctaagaagccgagacggaaaatgtcatcatatgcattttttgtg 136 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 196 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 |||||||||||||||||||||||||||||| Sbjct: 197 ttttctaagaagtgctcagagaggtggaag 226 Score = 127 bits (64), Expect = 8e-27 Identities = 64/64 (100%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 2205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 604 Query: 2206 aagg 2209 |||| Sbjct: 605 aagg 608 >Z95115 Human DNA sequence from BAC 445C9 on chromosome 22q12.1. Length = 131398 Score = 337 bits (170), Expect = 4e-90 Identities = 207/224 (92%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 58656 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 58715 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58716 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagtt 58775 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccact 2531 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 58776 aacacactaccgaatgtgtctttagatagccctgtcctgatggtattttcaatagccgct 58835 Query: 2532 aaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 58836 aaccttgcctggtacagtatgggggctgtaaattggcatggaaa 58879 Score = 325 bits (164), Expect = 2e-86 Identities = 173/176 (98%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 58290 ttcggccttcttcctgttctgctctgcgtatcgcccaaaaatcaaaggagaacatcctgg 58349 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 58350 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgccgcaga 58409 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58410 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 58465 Score = 254 bits (128), Expect = 5e-65 Identities = 143/148 (96%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 58142 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaggcggacaaggccc 58201 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58202 attacgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 58261 Query: 448 aggatcccaatgcacccaagaggcctcc 475 ||||||| ||||||||||||||| |||| Sbjct: 58262 aggatccgaatgcacccaagaggactcc 58289 Score = 250 bits (126), Expect = 8e-64 Identities = 141/146 (96%) Strand = Plus / Plus Query: 5 gcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgcaaa 64 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| Sbjct: 57998 gcaaaggagatcctaagaagctgagaggcaaaatgtcatcacatgcattttttgggcaaa 58057 Query: 65 cttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagtttt 124 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 58058 cttgtcgggaggcgcataagaagaagcacccagatgcttcagtcaacctctcagagtttt 58117 Query: 125 ctaagaagtgctcagagaggtggaag 150 |||||||||||||||||||||||||| Sbjct: 58118 ctaagaagtgctcagagaggtggaag 58143 Score = 127 bits (64), Expect = 8e-27 Identities = 64/64 (100%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 2205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58462 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 58521 Query: 2206 aagg 2209 |||| Sbjct: 58522 aagg 58525 >X12796 Bovine mRNA for high mobility group 1 (HMG1) protein Length = 1236 Score = 335 bits (169), Expect = 2e-89 Identities = 209/226 (92%), Gaps = 2/226 (0%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnn-- 2409 |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 794 cttgtctataaagcatttaacccccctgtacacacctcactccttttaaagaaaaaaaaa 853 Query: 2410 ttgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatag 2469 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 854 ttgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatag 913 Query: 2470 ttaacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagcca 2529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 ttaacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagcca 973 Query: 2530 ctaaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 ctaaccttgcctggtacagtatgggggttgtaaattggcatggaaa 1019 Score = 258 bits (130), Expect = 3e-66 Identities = 145/150 (96%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg 178 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 179 caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag 238 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 |||||||||||||||||||||||||||||| Sbjct: 239 ttttctaagaagtgctcagagaggtggaag 268 Score = 238 bits (120), Expect = 3e-60 Identities = 141/148 (95%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 267 agaccatgtctgctaaagagaaaggaaaatttgaagacatggcaaaggcggacaaggccc 326 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 |||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||| Sbjct: 327 gttatgaaagagaaatgaaaacttatattcctcctaaaggggaaacaaaaaagaagttca 386 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||||||||||||||| ||||||||||| Sbjct: 387 aggatcccaatgcacctaagaggcctcc 414 Score = 230 bits (116), Expect = 7e-58 Identities = 161/176 (91%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||| ||| | || || ||||||||||| |||||||||||||| ||||||||||| Sbjct: 415 ttcggcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctgg 474 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 475 cctgtctattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcgga 534 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 ||| |||||||||||||| ||||||||||| |||||||||||||| || ||||||| Sbjct: 535 tgataagcagccttatgagaagaaggctgctaagctgaaggaaaagtatgaaaagg 590 Score = 95.6 bits (48), Expect = 3e-17 Identities = 60/64 (93%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 2205 ||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 587 aaggatattgccgcataccgagctaaagggaaacctgatgcagcaaaaaagggagttgtc 646 Query: 2206 aagg 2209 |||| Sbjct: 647 aagg 650 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2323 taagttggttctagcgcag 2341 ||||||||||||||||||| Sbjct: 764 taagttggttctagcgcag 782 >M26110 Bovine high-mobility-group protein (HMG-1) mRNA, 3' end. Length = 791 Score = 327 bits (165), Expect = 4e-87 Identities = 208/226 (92%), Gaps = 2/226 (0%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnn-- 2409 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaaaa 399 Query: 2410 ttgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatag 2469 || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 400 ttaaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatag 459 Query: 2470 ttaacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagcca 2529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 ttaacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagcca 519 Query: 2530 ctaaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 520 ctaaccctgcctggtacagtatgggggttgtaaattggcatggaaa 565 Score = 163 bits (82), Expect = 1e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 1032 tgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcagatg 1091 |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 14 tgtctattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcggatg 73 Query: 1092 acaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 | |||||||||||||| ||||||||||| |||||||||||||| || ||||||| Sbjct: 74 ataagcagccttatgagaagaaggctgctaagctgaaggaaaagtatgaaaagg 127 Score = 95.6 bits (48), Expect = 3e-17 Identities = 60/64 (93%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 2205 ||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 124 aaggatattgccgcataccgagccaaagggaagcctgatgcagcaaaaaagggagttgtc 183 Query: 2206 aagg 2209 |||| Sbjct: 184 aagg 187 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2323 taagttggttctagcgcag 2341 ||||||||||||||||||| Sbjct: 301 taagttggttctagcgcag 319 >AF009343 Mus musculus HMG-like protein (Trf) mRNA, complete cds. Length = 1328 Score = 305 bits (154), Expect = 2e-80 Identities = 197/216 (91%) Strand = Plus / Plus Query: 2360 taaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnnttgaaatgta 2419 ||||||||||||||||||| | ||| |||||||||||||||| |||||||||| Sbjct: 814 taaagcatttaacccccctcttcacttctcactccttttaaagaaaaaaattgaaatgta 873 Query: 2420 aggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagttaacacact 2479 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 874 aggctgtgtaagatttgtttttaaactgtacagtgtctttttctgtatagttaacacact 933 Query: 2480 accgaatgtgtctttagatagccctgtcctggtggtattttcaatagccactaaccttgc 2539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 accgaatgtgtctttagatagccctgtcctggtggtattttcaatagccactaaccttgc 993 Query: 2540 ctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||||| ||||||||||||||||||||||||| Sbjct: 994 ctggtacagtctgggggttgtaaattggcatggaaa 1029 Score = 220 bits (111), Expect = 7e-55 Identities = 141/150 (94%), Gaps = 2/150 (1%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct: 137 atgggcaaaggagatcctaagaagccgaga--caaaatgtcctcatatgcattctttgtg 194 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 195 caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag 254 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 ||||| |||||||||||||||||||||||| Sbjct: 255 ttttccaagaagtgctcagagaggtggaag 284 Score = 176 bits (89), Expect = 9e-42 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||| || || |||||||||||||||||||| || |||||||| | Sbjct: 283 agaccatgtctgctaaagaaaaggggaaatttgaagatatggcaaaggctgacaaggctc 342 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 |||||| |||||||||||||||||| | ||| |||||| |||||| ||||||||||||| Sbjct: 343 gttatggaagagaaatgaaaacctacaccccccccaaa--ggagaccaaaaagaagttca 400 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||| ||||||||||||||||||||||| Sbjct: 401 aggaccccaatgcacccaagaggcctcc 428 Score = 170 bits (86), Expect = 6e-40 Identities = 143/162 (88%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||||||| | ||||| |||||||| ||||| ||||||||||| || |||||| | Sbjct: 429 ttcggccttcttcttgttctgttctgagtaccgccccaaaatcaaaggcgagcatcctcg 488 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 | | |||||||||||| |||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 489 cttatccattggtgatcttgcaaagaaactaggagagatgtggaacaacactgcagcaga 548 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaagga 1131 |||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 549 tgacaagcagccctatgagaagaaagctgccaagctgaagga 590 Score = 73.8 bits (37), Expect = 1e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2145 gaaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgt 2204 ||||||||||||||| || ||||||||||||| ||||||||||| |||||||| || || Sbjct: 600 gaaggatattgctgcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggt 659 Query: 2205 caagg 2209 ||||| Sbjct: 660 caagg 664 >M21683;M21684 Pig nonhistone protein HMG1 mRNA, complete cds. Length = 2192 Score = 303 bits (153), Expect = 6e-80 Identities = 209/227 (92%), Gaps = 4/227 (1%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccc-tgtacacaactcactccttttaaagnnnnnnn- 2409 |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 682 cttgtctataaagcatttaaccccccctgtacacaactcactccttttaaagaaaaaaaa 741 Query: 2410 ttgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnn-gtata 2468 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 742 ttgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcttttttttgtata 801 Query: 2469 gttaacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagcc 2528 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 802 gttaacacactaccgaatgtg-ctttagatagccctgtcctggtggtattttcaatagcc 860 Query: 2529 actaaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 actaaccttgcctggtacagtatgggggttgtaaattggcatggaaa 907 Score = 274 bits (138), Expect = 5e-71 Identities = 147/150 (98%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg 68 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 caaacttgccgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 128 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 |||||||||||||||||||| ||||||||| Sbjct: 129 ttttctaagaagtgctcagaaaggtggaag 158 Score = 246 bits (124), Expect = 1e-62 Identities = 142/148 (95%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 157 agaccatgtctgctaaagagaaaggaaaatttgaagacatggcaaaggcggacaaggccc 216 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 |||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||| Sbjct: 217 gttatgaaagagaaatgaaaacttacatacctcctaaaggggagacaaaaaagaagttca 276 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||||||||||||||||||||||||||| Sbjct: 277 aggatcccaatgcacccaagaggcctcc 304 Score = 238 bits (120), Expect = 3e-60 Identities = 162/176 (92%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||| ||| | || || ||||||||||| ||||||||||||||||| |||||||| Sbjct: 305 ttcggcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggagagcatcctgg 364 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 ||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 365 cctatccattggtgatgttgcaaagaaactgggagagatgtggaataacaccgctgcaga 424 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 ||||||||| |||||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 425 tgacaagcacccttatgaaaagaaggctgctaagctgaaggagaagtacgaaaagg 480 Score = 103 bits (52), Expect = 1e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 2205 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 477 aaggatattgctgcataccgagctaaagggaagcctgatgcagcaaaaaagggagtcgtc 536 Query: 2206 aagg 2209 |||| Sbjct: 537 aagg 540 >L13805 Homo sapiens (clone 06) high mobility group 1 protein mRNA Length = 273 Score = 260 bits (131), Expect = 8e-67 Identities = 166/181 (91%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 85 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 144 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagtt 2471 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 145 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagtt 204 Query: 2472 aacacactaccgaatgtgtctttagatagccctgtcctggtggtatttt-caatagccac 2530 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 aacacactaccgaatgtgtctttagatagccctgtcctggtggtattttgcaatagccac 264 Query: 2531 t 2531 | Sbjct: 265 t 265 >D14718 Human chromosomal protein HMG1 related gene. Length = 2140 Score = 252 bits (127), Expect = 2e-64 Identities = 194/221 (87%) Strand = Plus / Plus Query: 2355 gtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnnttgaa 2414 |||||||||||||||||||| |||| ||||| ||||||||||||||| | ||| Sbjct: 1582 gtctataaagcatttaaccctactgttcacaagtcactccttttaaagaaaaaaatggaa 1641 Query: 2415 atgtaaggctgtgtaagatttgtttttaaactgtacagtgtcnnnnnnngtatagttaac 2474 ||||||| ||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 1642 atgtaagtctgtgtaggatttgtttttaaactgtacagtgtctttttttataaagttaac 1701 Query: 2475 acactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagccactaac 2534 |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 1702 acactaccgaatgtgtctttagatagccctctcctggtggtgttttcaatagccactaac 1761 Query: 2535 cttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1762 cttgcctggtgcagtatgcgggttgtaaattggcatggaaa 1802 Score = 244 bits (123), Expect = 5e-62 Identities = 141/147 (95%) Strand = Plus / Plus Query: 4 ggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgcaa 63 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 922 ggcaaaggagattctaagaagccaagaggcaaaatgtcatcatatgcattttttgtgcaa 981 Query: 64 acttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagttt 123 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 982 acttgtcgggaagagcataagaagcagcacccagatgcttcagtcaacttctcagagttt 1041 Query: 124 tctaagaagtgctcagagaggtggaag 150 |||||||| ||||||||||||||||| Sbjct: 1042 tctaagaaaggctcagagaggtggaag 1068 Score = 230 bits (116), Expect = 7e-58 Identities = 141/148 (95%), Gaps = 1/148 (0%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 |||||||||||||||||||||||||| ||||||||||||||||||| | | ||||||||| Sbjct: 1067 agaccatgtctgctaaagagaaaggacaatttgaagatatggcaaaggtg-acaaggccc 1125 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1126 attatgaaagagaagtgaaaacctaaatccctcccaaaggggagacaaaaaagaagttca 1185 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||||||||||||||||||||||||||| Sbjct: 1186 aggatcccaatgcacccaagaggcctcc 1213 Score = 222 bits (112), Expect = 2e-55 Identities = 157/172 (91%) Strand = Plus / Plus Query: 974 gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg 1033 ||||| ||||| |||||||||||||||| ||||||||| ||||||||||| | ||||||| Sbjct: 1218 gcctttttcctgttctgctctgagtatcacccaaaaattaaaggagaacaacttggcctg 1277 Query: 1034 tccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcagatgac 1093 ||||| ||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1278 cccattagtgatgtcgtgaagaaactgggagagatgtggaataacactgctgcagaagac 1337 Query: 1094 aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 |||||||||| ||||||||||||||| ||||| |||||||||||| |||||| Sbjct: 1338 aagcagccttgtgaaaagaaggctgcaaagctaaaggaaaaatacaaaaagg 1389 Score = 95.6 bits (48), Expect = 3e-17 Identities = 60/64 (93%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtc 2205 |||||||||||||||||| |||||||||| |||||||||||||||||||||||| || || Sbjct: 1386 aaggatattgctgcatattgagctaaagggaagcctgatgcagcaaaaaagggatttatc 1445 Query: 2206 aagg 2209 |||| Sbjct: 1446 aagg 1449 >Y00365 Chinese hamster HMG-1 gene for high mobility group protein 1 Length = 2058 Score = 246 bits (124), Expect = 1e-62 Identities = 163/176 (92%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 192 ttcggccttcttcttgttctgttctgagtatcgcccaaaaatcaaaggagaacatccagg 251 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 252 gctgtccattggtgatgttgcaaagaaactgggagagatgtggaacaacactgctgcaga 311 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 |||||||||||| ||||||||||||||||| || |||||||| || || ||||||| Sbjct: 312 tgacaagcagccctatgaaaagaaggctgctaaactgaaggagaagtatgaaaagg 367 Score = 198 bits (100), Expect = 3e-48 Identities = 136/148 (91%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||| || ||||||||||| || |||||||| || ||||| || | Sbjct: 44 agaccatgtctgctaaagaaaagggaaaatttgaggacatggcaaaggctgacaaagctc 103 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 104 gttatgaaagagaaatgaaaacctacatcccccccaaaggggagaccaaaaagaagttca 163 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||| ||||||||||||||||||||||| Sbjct: 164 aggaccccaatgcacccaagaggcctcc 191 Score = 117 bits (59), Expect = 7e-24 Identities = 89/99 (89%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 2360 taaagcatttaacccccctgtacacaactcactccttttaaag--nnnnnnnttgaaatg 2417 ||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 599 taaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaaaattgaa-tg 657 Query: 2418 taaggctgtgtaagatttgtttttaaactgtacagtgtc 2456 ||||||||||||||||||||||||||||||||||||||| Sbjct: 658 taaggctgtgtaagatttgtttttaaactgtacagtgtc 696 Score = 117 bits (59), Expect = 7e-24 Identities = 98/107 (91%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 2469 gttaacacactaccgaatgtgtctttagatagccctgtcctggtggtattttcaatagcc 2528 |||||||||||||||| |||||||| ||| | ||||||||||||||||||||||| || Sbjct: 709 gttaacacactaccga-tgtgtcttg-gatggtcctgtcctggtggtattttcaatgacc 766 Query: 2529 actaaccttgcctggtacagtatgggggttgtaaattggcatggaaa 2575 |||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 767 actaacct-gcctggtacagtctgggggttgtaaattggcatggaaa 812 Score = 65.9 bits (33), Expect = 2e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 106 gtcaacttctcagagttttctaagaagtgctcagagaggtggaag 150 ||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 1 gtcaacttctcagagttctcgaagaagtgctcagaaaggtggaag 45 Score = 58.0 bits (29), Expect = 6e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaaggg 2198 |||||||||||||| || ||||||||||||| || |||||||| |||||||| Sbjct: 364 aaggatattgctgcttacagagctaaaggaaaacccgatgcagcgaaaaaggg 416 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2323 taagttggttctagcgcag 2341 ||||||||||||||||||| Sbjct: 541 taagttggttctagcgcag 559 >M63852 Rat high mobility group 1 protein synthetic gene, complete cds. Length = 924 Score = 226 bits (114), Expect = 1e-56 Identities = 141/150 (94%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 89 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg 148 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 ||||| || ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 149 caaacctgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag 208 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || |||||||||||||||||||||||| Sbjct: 209 ttctccaagaagtgctcagagaggtggaag 238 Score = 206 bits (104), Expect = 1e-50 Identities = 137/148 (92%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||| || || |||||||||||||||||||| || |||||||| | Sbjct: 237 agaccatgtctgctaaagaaaaggggaaatttgaagatatggcaaaggctgacaaggctc 296 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 297 gttatgaaagagaaatgaaaacctacatcccccccaaaggggagaccaaaaagaagttca 356 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||| |||||||| |||||||||||||| Sbjct: 357 aggaccccaatgcccccaagaggcctcc 384 Score = 202 bits (102), Expect = 2e-49 Identities = 147/162 (90%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||||||| | ||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 385 ttcggccttcttcttgttctgttctgagtaccgcccaaaaatcaaaggcgagcatcctgg 444 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 | | |||||||||||||||||||||||| | |||||||||||||| ||||||||||| || Sbjct: 445 cttatccattggtgatgttgcgaagaaattaggagagatgtggaacaacactgctgcgga 504 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaagga 1131 |||||||||||| |||||||||||||| || ||||||||||| Sbjct: 505 tgacaagcagccctatgaaaagaaggccgccaagctgaagga 546 Score = 167 bits (84), Expect = 9e-39 Identities = 98/105 (93%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 762 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 821 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtc 2456 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtc 866 Score = 73.8 bits (37), Expect = 1e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2145 gaaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgt 2204 ||||||||||||||| || ||||||||||||| ||||||||||| |||||||| || || Sbjct: 556 gaaggatattgctgcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggt 615 Query: 2205 caagg 2209 ||||| Sbjct: 616 caagg 620 >Y00463 Rat mRNA for high mobility group protein HMG1 Length = 825 Score = 226 bits (114), Expect = 1e-56 Identities = 141/150 (94%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 28 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg 87 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 ||||| || ||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 88 caaacctgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag 147 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || |||||||||||||||||||||||| Sbjct: 148 ttctccaagaagtgctcagagaggtggaag 177 Score = 206 bits (104), Expect = 1e-50 Identities = 137/148 (92%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||||||||| || || |||||||||||||||||||| || |||||||| | Sbjct: 176 agaccatgtctgctaaagaaaaggggaaatttgaagatatggcaaaggctgacaaggctc 235 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 236 gttatgaaagagaaatgaaaacctacatcccccccaaaggggagaccaaaaagaagttca 295 Query: 448 aggatcccaatgcacccaagaggcctcc 475 |||| |||||||| |||||||||||||| Sbjct: 296 aggaccccaatgcccccaagaggcctcc 323 Score = 202 bits (102), Expect = 2e-49 Identities = 147/162 (90%) Strand = Plus / Plus Query: 970 ttcggccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctgg 1029 ||||||||||||| | ||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 324 ttcggccttcttcttgttctgttctgagtaccgcccaaaaatcaaaggcgagcatcctgg 383 Query: 1030 cctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcaga 1089 | | |||||||||||||||||||||||| | |||||||||||||| ||||||||||| || Sbjct: 384 cttatccattggtgatgttgcgaagaaattaggagagatgtggaacaacactgctgcgga 443 Query: 1090 tgacaagcagccttatgaaaagaaggctgcgaagctgaagga 1131 |||||||||||| |||||||||||||| || ||||||||||| Sbjct: 444 tgacaagcagccctatgaaaagaaggccgccaagctgaagga 485 Score = 167 bits (84), Expect = 9e-39 Identities = 98/105 (93%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagnnnnnnntt 2411 ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 701 cttgtctataaagcatttaacccccctgtacacaactcactccttttaaagaaaaaaatt 760 Query: 2412 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtc 2456 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 gaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtc 805 Score = 73.8 bits (37), Expect = 1e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 2145 gaaggatattgctgcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgt 2204 ||||||||||||||| || ||||||||||||| ||||||||||| |||||||| || || Sbjct: 495 gaaggatattgctgcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggt 554 Query: 2205 caagg 2209 ||||| Sbjct: 555 caagg 559 >X80466 M.musculus HMG1-R-227 gene Length = 184 Score = 210 bits (106), Expect = 7e-52 Identities = 130/138 (94%) Strand = Plus / Plus Query: 13 gatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgcaaacttgtcgg 72 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1 gatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtgcaaacttgccgg 60 Query: 73 gaggagcataagaagaagcacccagatgcttcagtcaacttctcagagttttctaagaag 132 |||||||| |||||||||||||| |||||||| ||||||||||||||||| || |||||| Sbjct: 61 gaggagcacaagaagaagcacccggatgcttctgtcaacttctcagagttctccaagaag 120 Query: 133 tgctcagagaggtggaag 150 |||||||||||||||||| Sbjct: 121 tgctcagagaggtggaag 138 Score = 67.9 bits (34), Expect = 6e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaa 373 ||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 137 agaccatgtctgctaaagaaaaggggaaatttgaagatatggcaaa 182 >X80462 M.musculus HMG1-R-154 gene Length = 190 Score = 184 bits (93), Expect = 4e-44 Identities = 135/149 (90%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||| Sbjct: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcgctctttgtg 60 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 |||| || |||||||||| |||||||||||||| |||||||| ||||||||||||| | Sbjct: 61 aaaacctgctgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcaggg 120 Query: 121 ttttctaagaagtgctcagagaggtggaa 149 || || ||||||||||||||||||||||| Sbjct: 121 ttctccaagaagtgctcagagaggtggaa 149 Score = 48.1 bits (24), Expect = 0.006 Identities = 36/40 (90%) Strand = Plus / Plus Query: 330 accatgtctgctaaagagaaaggaaaatttgaagatatgg 369 ||||||||||||||||| || || |||||||||| ||||| Sbjct: 151 accatgtctgctaaagaaaaggggaaatttgaaggtatgg 190 >X80461 M.musculus HMG1-R-145 gene Length = 196 Score = 147 bits (74), Expect = 8e-33 Identities = 126/142 (88%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 9 aggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgcaaacttg 68 |||||||||||||||||| ||||||| |||||| | ||||||||| ||||||||||| || Sbjct: 9 aggagatcctaagaagccaagaggcacaatgtccttatatgcattctttgtgcaaacctg 68 Query: 69 tcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagttttctaa 128 ||||||||||| | || || |||||||||||||| ||||||||||||||| | || || Sbjct: 69 ccgggaggagcacagga-gagacacccagatgcttctgtcaacttctcagagctctccaa 127 Query: 129 gaagtgctcagagaggtggaag 150 |||||||||||||||||||||| Sbjct: 128 gaagtgctcagagaggtggaag 149 Score = 58.0 bits (29), Expect = 6e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 332 catgtctgctaaagagaaaggaaaatttgaagatatggcaa 372 ||||||||||||||| || || ||||||||||||||||||| Sbjct: 151 catgtctgctaaagaaaaggggaaatttgaagatatggcaa 191 >X80459 M.musculus HMG1-R-177 gene Length = 173 Score = 133 bits (67), Expect = 1e-28 Identities = 127/146 (86%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 2 tgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgc 61 |||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||| ||| Sbjct: 2 tgggcaaaaaagatcctaagaagctgagaggcaaaatgtcctcatatgcattctttttgc 61 Query: 62 aaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagt 121 |||| | | ||| | |||| ||||||||||||| ||||||| ||||||| ||||||| Sbjct: 62 aaaccttttgggtgtagcacaagaagaagcacctggatgctt--ttcaacttttcagagt 119 Query: 122 tttctaagaagtgctcagagaggtgg 147 | |||||||||||||||||||||||| Sbjct: 120 tctctaagaagtgctcagagaggtgg 145 >X80467 M.musculus HMG1-R-87 gene Length = 190 Score = 133 bits (67), Expect = 1e-28 Identities = 127/146 (86%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 2 tgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgc 61 |||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||| ||| Sbjct: 2 tgggcaaaaaagatcctaagaagctgagaggcaaaatgtcctcatatgcattctttttgc 61 Query: 62 aaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagt 121 |||| | | ||| | |||| ||||||||||||| ||||||| ||||||| ||||||| Sbjct: 62 aaaccttttgggtgtagcacaagaagaagcacctggatgctt--ttcaacttttcagagt 119 Query: 122 tttctaagaagtgctcagagaggtgg 147 | |||||||||||||||||||||||| Sbjct: 120 tctctaagaagtgctcagagaggtgg 145 Score = 52.0 bits (26), Expect = 4e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatgg 369 |||||||| |||||||||| || || |||||||||||||||| Sbjct: 147 agaccatgactgctaaagaaaaggggaaatttgaagatatgg 188 >X80465 M.musculus HMG1-R-168 gene Length = 181 Score = 133 bits (67), Expect = 1e-28 Identities = 131/151 (86%), Gaps = 1/151 (0%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatc-atatgcattttttgt 59 ||||||||||||||||||||||||| |||| |||||||||| | ||||||||| ||| | Sbjct: 1 atgggcaaaggagatcctaagaagctgagacgcaaaatgtcctgtatatgcattctttat 60 Query: 60 gcaaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcaga 119 |||||| || | ||||||||| |||| ||| ||| |||||||| |||||||||||||| Sbjct: 61 gcaaacctgccaggaggagcacaagacaaagtacctggatgcttctgtcaacttctcaga 120 Query: 120 gttttctaagaagtgctcagagaggtggaag 150 ||| || |||||||| ||||||||||||||| Sbjct: 121 gttctccaagaagtgttcagagaggtggaag 151 Score = 48.1 bits (24), Expect = 0.006 Identities = 30/32 (93%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaattt 359 ||||||||||||||||||| ||||| |||||| Sbjct: 150 agaccatgtctgctaaagaaaaagggaaattt 181 >X80463 M.musculus HMG1-R-159 gene Length = 192 Score = 131 bits (66), Expect = 5e-28 Identities = 127/146 (86%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 2 tgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgc 61 |||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||| ||| Sbjct: 2 tgggcaaaaaagatcctaagaagctgagaggcaaaatgtcctcatatgcattctttttgc 61 Query: 62 aaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagt 121 |||| | | ||| | |||| ||||||||||||| |||||||| ||||||| ||||||| Sbjct: 62 aaaccttttgggtgtagcacaagaagaagcacctggatgcttc-ttcaacttttcagagt 120 Query: 122 tttctaagaagtgctcagagaggtgg 147 | |||| ||||||||||||||||||| Sbjct: 121 tctctatgaagtgctcagagaggtgg 146 Score = 52.0 bits (26), Expect = 4e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatgg 369 |||||||| |||||||||| || || |||||||||||||||| Sbjct: 148 agaccatgactgctaaagaaaaggggaaatttgaagatatgg 189 >L32859 Rainbow trout HMG-1 gene exons 2-5, complete cds. Length = 3882 Score = 127 bits (64), Expect = 8e-27 Identities = 124/144 (86%) Strand = Plus / Plus Query: 12 agatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgcaaacttgtcg 71 |||||| | ||||||||| ||||| ||||| || ||||| | ||||| || || ||||| Sbjct: 1285 agatccaaggaagccgaggggcaagatgtcctcctatgcctactttgtccagacctgtcg 1344 Query: 72 ggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagttttctaagaa 131 ||||||||| |||||||| |||||||| ||||| ||||||||||||||||| || ||||| Sbjct: 1345 ggaggagcacaagaagaaacacccagaagcttccgtcaacttctcagagttctccaagaa 1404 Query: 132 gtgctcagagaggtggaaggtaag 155 |||||| ||||| ||||||||||| Sbjct: 1405 gtgctctgagagatggaaggtaag 1428 Score = 50.1 bits (25), Expect = 0.001 Identities = 97/121 (80%) Strand = Plus / Plus Query: 1028 ggcctgtccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgca 1087 |||||||| || |||||||| || ||||| |||||||||| |||||| ||| | || Sbjct: 2358 ggcctgtctatcggtgatgtggccaagaagctgggagagaagtggaacaacctaacagcg 2417 Query: 1088 gatgacaagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaaggta 1147 || |||||| || ||||| ||||||||| | ||||||||||| || ||||| |||||| Sbjct: 2418 gaggacaaggtaccctatgagaagaaggcttccaagctgaaggagaagtacgagaaggta 2477 Query: 1148 a 1148 | Sbjct: 2478 a 2478 Score = 46.1 bits (23), Expect = 0.023 Identities = 122/155 (78%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||| || ||||| || || ||||| ||| |||| ||| |||||||| | Sbjct: 1845 agaccatgtctgccaaggagaaggggaagtttgaggatctggccaaactggacaaggtgc 1904 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 | ||||| || || |||| | ||| || |||||||| || |||| || |||| ||||| Sbjct: 1905 gatatgagagggagatgaggagctacattcctcccaagggagagaagaagaagaggttca 1964 Query: 448 aggatcccaatgcacccaagaggcctccgtgagta 482 |||| ||||| || |||||||| || |||||||| Sbjct: 1965 aggaccccaacgcccccaagagaccatcgtgagta 1999 Score = 44.1 bits (22), Expect = 0.090 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccc 2377 ||||| |||||||||||||||||||| Sbjct: 3186 cttgtttataaagcatttaacccccc 3211 >X80460 M.musculus HMG1-R-135 gene Length = 190 Score = 127 bits (64), Expect = 8e-27 Identities = 126/144 (87%), Gaps = 2/144 (1%) Strand = Plus / Plus Query: 2 tgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgc 61 |||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||| ||| Sbjct: 2 tgggcaaaaaagatcctaagaagctgagaggcaaaatgtcctcatatgcattctttttgc 61 Query: 62 aaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagt 121 |||| | ||| | |||| |||||||||||||| |||||||| ||||||| ||||||| Sbjct: 62 aaaccttctgggtgtagcacaagaagaagcacccggatgcttc-ttcaactt-tcagagt 119 Query: 122 tttctaagaagtgctcagagaggt 145 | |||||||||||||||||||||| Sbjct: 120 tctctaagaagtgctcagagaggt 143 Score = 52.0 bits (26), Expect = 4e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatgg 369 |||||||| |||||||||| || || |||||||||||||||| Sbjct: 147 agaccatgactgctaaagaaaaggggaaatttgaagatatgg 188 >X80464 M.musculus HMG1-R-161 gene Length = 195 Score = 125 bits (63), Expect = 3e-26 Identities = 128/147 (87%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 2 tgggcaaaggagatcctaagaagcc-gagaggcaaaatgtcatcatatgcattttttgtg 60 |||||||| ||||||||||||| | ||||||||||||||| ||||||||||| ||| || Sbjct: 2 tgggcaaaaaagatcctaagaaggctgagaggcaaaatgtcctcatatgcattctttttg 61 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 ||||| | | ||| | |||| ||||||||||||| |||||||| ||||||| |||||| Sbjct: 62 caaaccttttgggtgtagcacaagaagaagcacctggatgcttc-ttcaacttttcagag 120 Query: 121 ttttctaagaagtgctcagagaggtgg 147 || |||||||||||||||||||||||| Sbjct: 121 ttctctaagaagtgctcagagaggtgg 147 Score = 52.0 bits (26), Expect = 4e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatgg 369 |||||||| |||||||||| || || |||||||||||||||| Sbjct: 149 agaccatgactgctaaagaaaaggggaaatttgaagatatgg 190 >X02666 Trout mRNA for high mobility group protein HMG-T Length = 716 Score = 117 bits (59), Expect = 7e-24 Identities = 119/139 (85%) Strand = Plus / Plus Query: 12 agatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtgcaaacttgtcg 71 |||||| | ||||||||| ||||| ||||| || ||||| | ||||| || ||| |||| Sbjct: 9 agatccaaggaagccgaggggcaagatgtcctcctatgcctactttgtccagactcgtcg 68 Query: 72 ggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagttttctaagaa 131 ||||||||| |||||||| |||||||| ||||| ||||||||||||||||| || ||||| Sbjct: 69 ggaggagcacaagaagaaacacccagaagcttccgtcaacttctcagagttctccaagaa 128 Query: 132 gtgctcagagaggtggaag 150 |||||| ||||| |||||| Sbjct: 129 gtgctctgagagatggaag 147 Score = 44.1 bits (22), Expect = 0.090 Identities = 112/142 (78%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaagcggacaaggccc 387 ||||||||||||| || ||||| || || ||||| ||| |||| ||| |||||||| | Sbjct: 146 agaccatgtctgccaaggagaaggggaagtttgaggatctggccaaactggacaaggtgc 205 Query: 388 gttatgaaagagaaatgaaaacctatatccctcccaaaggggagacaaaaaagaagttca 447 | ||||| || || |||| | ||| || |||||||| || |||| || |||| ||||| Sbjct: 206 gatatgagagggagatgaggagctacattcctcccaagggagagaagaagaagaggttca 265 Query: 448 aggatcccaatgcacccaagag 469 |||| ||||| || |||||||| Sbjct: 266 aggaccccaacgcccccaagag 287 Score = 44.1 bits (22), Expect = 0.090 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2352 cttgtctataaagcatttaacccccc 2377 ||||| |||||||||||||||||||| Sbjct: 648 cttgtttataaagcatttaacccccc 673 >U21933 Xenopus laevis high mobility group protein-1 (HMG-1) mRNA, complete Length = 1552 Score = 107 bits (54), Expect = 7e-21 Identities = 126/150 (84%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||| ||||| |||||||||||||| ||||| |||||||| |||||||| | |||||| Sbjct: 57 atgggtaaaggtgatcctaagaagccaagaggaaaaatgtcctcatatgcttactttgtg 116 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 ||||| || | || ||||| ||||| |||||||| ||||| || || || || ||||| Sbjct: 117 caaacatgcagagaagagcacaagaaaaagcaccctgatgcctctgtaaattttgcagag 176 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 ||||||||||| |||||||| ||||||||| Sbjct: 177 ttttctaagaaatgctcagaaaggtggaag 206 Score = 89.7 bits (45), Expect = 2e-15 Identities = 45/45 (100%) Strand = Plus / Plus Query: 2353 ttgtctataaagcatttaacccccctgtacacaactcactccttt 2397 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 ttgtctataaagcatttaacccccctgtacacaactcactccttt 749 Score = 89.7 bits (45), Expect = 2e-15 Identities = 96/113 (84%) Strand = Plus / Plus Query: 357 tttgaagatatggcaaaagcggacaaggcccgttatgaaagagaaatgaaaacctatatc 416 |||||||||||||||||||| ||||| | || ||||| || |||||||||| ||||| Sbjct: 231 tttgaagatatggcaaaagccgacaaagttcgctatgagagggaaatgaaaagttatatt 290 Query: 417 cctcccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagag 469 || |||||||| || |||||||||| ||||||||| || |||||||| ||||| Sbjct: 291 ccacccaaaggagaaacaaaaaagaggttcaaggaccctaatgcaccaaagag 343 Score = 87.7 bits (44), Expect = 7e-15 Identities = 82/92 (89%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 1055 aaactgggagagatgtggaataacactgctgcagatgacaagcagccttatgaaaagaag 1114 |||||||||||||||||||||||||||||| |||||||||| | ||| |||| || |||| Sbjct: 435 aaactgggagagatgtggaataacactgctacagatgacaaactgccctatg-aacgaag 493 Query: 1115 -gctgcgaagctgaaggaaaaatacgaaaagg 1145 ||||| ||||||||||| ||||| ||||||| Sbjct: 494 agctgccaagctgaaggagaaatatgaaaagg 525 Score = 73.8 bits (37), Expect = 1e-10 Identities = 94/111 (84%), Gaps = 4/111 (3%) Strand = Plus / Plus Query: 2464 gtatagttaacacactaccgaatgtgtctttagatagccctgtc--ctggtggtattttc 2521 |||||||||||||||||||||||||||| ||| ||| |||||| | ||||| || | Sbjct: 851 gtatagttaacacactaccgaatgtgtc--tagctagtcctgtcttatagtggttttgtt 908 Query: 2522 aatagccactaaccttgcctggtacagtatgggggttgtaaattggcatgg 2572 ||| |||||||||||||||| ||||||| ||||||||||| |||||||| Sbjct: 909 aattgccactaaccttgcctcttacagtaaaggggttgtaaactggcatgg 959 Score = 42.1 bits (21), Expect = 0.36 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 2413 aaatgtaaggctgtgtaagatttgtttttaaactgtacagt 2453 |||| ||| ||||||||||||||| |||| ||||||||||| Sbjct: 763 aaatataatgctgtgtaagatttgatttt-aactgtacagt 802 >I14731 Sequence 10 from patent US 5451670. Length = 2188 Score = 91.7 bits (46), Expect = 4e-16 Identities = 46/46 (100%) Strand = Plus / Minus Query: 2352 cttgtctataaagcatttaacccccctgtacacaactcactccttt 2397 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 cttgtctataaagcatttaacccccctgtacacaactcactccttt 1 >X63463 G.gallus HMG2a mRNA Length = 1073 Score = 89.7 bits (45), Expect = 2e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 46 tatgcattttttgtgcaaacttgtcgggaggagcataagaagaagcacccagatgcttca 105 ||||| || |||||||| || || || |||||||| ||||||||| ||||||| | | | Sbjct: 106 tatgccttctttgtgcagacgtgccgtgaggagcacaagaagaagaacccagaggttcct 165 Query: 106 gtcaacttctcagagttttctaagaagtgctcagagaggtggaag 150 |||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 166 gtcaactttgcagagttctctaagaagtgctcagagaggtggaag 210 Score = 40.1 bits (20), Expect = 1.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1094 aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 |||||||| ||| | || |||||||| ||||||||||| || ||||| |||| Sbjct: 475 aagcagccctataacaataaggctgctaagctgaaggagaagtacgagaagg 526 >Z29356 Gallus domesticus of h71t7 gene encoding G.domesticus expressed sequence Length = 237 Score = 81.8 bits (41), Expect = 4e-13 Identities = 74/85 (87%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||||||||| ||||| |||||||||||||| |||||||| ||||| || || |||||| Sbjct: 153 atgggcaaaggtgatcccaagaagccgagaggtaaaatgtcttcatacgccttctttgtg 212 Query: 61 caaacttgtcgggaggagcataaga 85 ||||| || ||| ||||||| |||| Sbjct: 213 caaacctgccggcaggagcacaaga 237 >D84418 Rat mRNA for chromosomal protein HMG2, complete cds. Length = 1072 Score = 77.8 bits (39), Expect = 6e-12 Identities = 84/99 (84%) Strand = Plus / Plus Query: 974 gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg 1033 ||||||||||| || |||||||| |||||||||| |||||| | ||||| || |||||| Sbjct: 375 gccttcttcctgttttgctctgaacatcgcccaaagatcaaaagtgaacaccccggcctg 434 Query: 1034 tccattggtgatgttgcgaagaaactgggagagatgtgg 1072 || ||||| ||| ||| ||||||||||| ||||||||| Sbjct: 435 tctattggagatactgcaaagaaactgggggagatgtgg 473 Score = 44.1 bits (22), Expect = 0.090 Identities = 118/150 (78%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 |||||||| || || || || |||||| | ||||| ||||| || || || || || ||| Sbjct: 75 atgggcaagggggaccccaacaagccgcggggcaagatgtcctcgtacgccttcttcgtg 134 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 || || || ||||||||||| ||||||||||| || || | || ||||||||| | ||| Sbjct: 135 cagacctgccgggaggagcacaagaagaagcatcccgactcgtcggtcaacttcgccgag 194 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || ||||| || || ||||| |||||| Sbjct: 195 ttctcgaagaaatgttcggagagatggaag 224 >Z46757 M.musculus mRNA for high mobility group 2 protein. Length = 870 Score = 77.8 bits (39), Expect = 6e-12 Identities = 84/99 (84%) Strand = Plus / Plus Query: 974 gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg 1033 ||||||||||| || |||||||| |||||||||| |||||| ||||| || |||||| Sbjct: 397 gccttcttcctgttttgctctgaaaatcgcccaaagatcaaaattgaacacccaggcctg 456 Query: 1034 tccattggtgatgttgcgaagaaactgggagagatgtgg 1072 || ||||| ||| ||||||||||||||| ||||||||| Sbjct: 457 tctattggagatactgcgaagaaactgggtgagatgtgg 495 Score = 44.1 bits (22), Expect = 0.090 Identities = 118/150 (78%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 |||||||| || || || || |||||| | ||||||||||| || || || || || ||| Sbjct: 97 atgggcaagggtgaccccaacaagccgcggggcaaaatgtcctcgtacgccttcttcgtg 156 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 || || || || |||||||| ||||||||||| || || | || || |||||| | ||| Sbjct: 157 cagacctgccgcgaggagcacaagaagaagcatcccgactcgtcggtgaacttcgccgag 216 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || ||||| ||||| ||||| |||||| Sbjct: 217 ttctccaagaaatgctccgagagatggaag 246 >U31513 Ambystoma mexicanum high mobility group protein-2 (HMG-2) mRNA, Length = 1048 Score = 75.8 bits (38), Expect = 3e-11 Identities = 122/150 (81%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||| ||||||||||| || ||||| | ||||| ||||| || || || | |||||| Sbjct: 19 atgggtaaaggagatccgaacaagccccggggcaagatgtcgtcctacgcctactttgtg 78 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 || || || |||||||||||||||||||||||||| || || || || |||||| | ||| Sbjct: 79 cagacgtgccgggaggagcataagaagaagcacccggacgcctccgtaaacttcgccgag 138 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || ||||| |||||||| || |||||||| Sbjct: 139 ttctctaaaaagtgctccgaacggtggaag 168 Score = 46.1 bits (23), Expect = 0.023 Identities = 23/23 (100%) Strand = Plus / Plus Query: 447 aaggatcccaatgcacccaagag 469 ||||||||||||||||||||||| Sbjct: 289 aaggatcccaatgcacccaagag 311 >D14314 Chicken mRNA for HMG-1, complete cds. Length = 740 Score = 69.9 bits (35), Expect = 2e-09 Identities = 88/105 (83%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 46 tatgcattttttgtgcaaacttgtcgggaggagcataagaagaagcacccagatgcttca 105 ||||| || |||||||| || || || |||||||| |||||||| |||||| | | | Sbjct: 66 tatgccttctttgtgcagacgtgccgtgaggagcacaagaagaa---cccagaggttcct 122 Query: 106 gtcaacttctcagagttttctaagaagtgctcagagaggtggaag 150 |||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 123 gtcaactttgcagagttctctaagaagtgctcagagaggtggaag 167 Score = 40.1 bits (20), Expect = 1.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1094 aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 |||||||| ||| | || |||||||| ||||||||||| || ||||| |||| Sbjct: 432 aagcagccctataacaataaggctgctaagctgaaggagaagtacgagaagg 483 >Z17240 Homo sapiens for mRNA encoding HMG2B. Length = 1066 Score = 69.9 bits (35), Expect = 2e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 974 gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg 1033 ||||||||||| || |||||||| |||||||||| |||||| | ||||| |||||||| Sbjct: 232 gccttcttcctgttttgctctgaacatcgcccaaagatcaaaagtgaacaccctggccta 291 Query: 1034 tccattggtgatgttgcgaagaaactgggagagatgtgg 1072 |||||||| ||| ||| |||||| |||| || |||||| Sbjct: 292 tccattggggatactgcaaagaaattgggtgaaatgtgg 330 Score = 38.2 bits (19), Expect = 5.5 Identities = 40/47 (85%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaa 374 ||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 80 agaccatgtctgcaaaggagaagtcgaagtttgaagatatggcaaaa 126 >M83665 Human high mobility group 2 protein (HMG-2) gene, complete cds. Length = 4341 Score = 69.9 bits (35), Expect = 2e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 974 gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg 1033 ||||||||||| || |||||||| |||||||||| |||||| | ||||| |||||||| Sbjct: 2327 gccttcttcctgttttgctctgaacatcgcccaaagatcaaaagtgaacaccctggccta 2386 Query: 1034 tccattggtgatgttgcgaagaaactgggagagatgtgg 1072 |||||||| ||| ||| |||||| |||| || |||||| Sbjct: 2387 tccattggggatactgcaaagaaattgggtgaaatgtgg 2425 Score = 56.0 bits (28), Expect = 2e-05 Identities = 121/152 (79%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||| |||||||| || || |||||| | ||||||||||| || || || || || ||| Sbjct: 1669 atgggtaaaggagaccccaacaagccgcggggcaaaatgtcctcgtacgccttcttcgtg 1728 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 || || || ||||| ||||| |||||||| ||||| || |||| ||||| ||| | || Sbjct: 1729 cagacctgccgggaagagcacaagaagaaacacccggactcttccgtcaatttcgcggaa 1788 Query: 121 ttttctaagaagtgctcagagaggtggaaggt 152 || || |||||||| || ||||| |||||||| Sbjct: 1789 ttctccaagaagtgttcggagagatggaaggt 1820 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2147 aggatattgctgcatatcg 2165 ||||||||||||||||||| Sbjct: 3078 aggatattgctgcatatcg 3096 Score = 38.2 bits (19), Expect = 5.5 Identities = 40/47 (85%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaa 374 ||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 2102 agaccatgtctgcaaaggagaagtcgaagtttgaagatatggcaaaa 2148 >X62534 H.sapiens HMG-2 mRNA Length = 1301 Score = 69.9 bits (35), Expect = 2e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 974 gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg 1033 ||||||||||| || |||||||| |||||||||| |||||| | ||||| |||||||| Sbjct: 515 gccttcttcctgttttgctctgaacatcgcccaaagatcaaaagtgaacaccctggccta 574 Query: 1034 tccattggtgatgttgcgaagaaactgggagagatgtgg 1072 |||||||| ||| ||| |||||| |||| || |||||| Sbjct: 575 tccattggggatactgcaaagaaattgggtgaaatgtgg 613 Score = 52.0 bits (26), Expect = 4e-04 Identities = 119/150 (79%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||| |||||||| || || |||||| | ||||||||||| || || || || || ||| Sbjct: 215 atgggtaaaggagaccccaacaagccgcggggcaaaatgtcctcgtacgccttcttcgtg 274 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 || || || ||||| ||||| |||||||| ||||| || |||| ||||| ||| | || Sbjct: 275 cagacctgccgggaagagcacaagaagaaacacccggactcttccgtcaatttcgcggaa 334 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || |||||||| || ||||| |||||| Sbjct: 335 ttctccaagaagtgttcggagagatggaag 364 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2146 aaggatattgctgcatatcg 2165 |||||||||||||||||||| Sbjct: 683 aaggatattgctgcatatcg 702 Score = 38.2 bits (19), Expect = 5.5 Identities = 40/47 (85%) Strand = Plus / Plus Query: 328 agaccatgtctgctaaagagaaaggaaaatttgaagatatggcaaaa 374 ||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 363 agaccatgtctgcaaaggagaagtcgaagtttgaagatatggcaaaa 409 >X98857 L.fluviatilis mRNA for HMG protein Length = 1650 Score = 67.9 bits (34), Expect = 6e-09 Identities = 121/150 (80%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 ||||| || |||||||| |||||||| | ||||| ||||| ||||| || | || ||| Sbjct: 73 atgggtaagggagatccgaagaagcccaagggcaagatgtcgtcatacgcctacttcgtg 132 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 || || || || |||||||| ||||||||| ||||||| || || |||||||| | ||| Sbjct: 133 cagacgtgccgcgaggagcacaagaagaagaacccagaggcgtcggtcaactttgccgag 192 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || ||||||||||| ||| |||||||| Sbjct: 193 ttctccaagaagtgctccgagcggtggaag 222 Score = 40.1 bits (20), Expect = 1.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1047 ttgcgaagaaactgggagagatgtggaa 1074 |||| ||||||||||| ||||||||||| Sbjct: 449 ttgccaagaaactgggtgagatgtggaa 476 >X67668 M.musculus mRNA for high mobility group 2 protein Length = 847 Score = 61.9 bits (31), Expect = 4e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 974 gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg 1033 ||||||| ||| || |||||||| |||||||||| |||||| ||| | || |||||| Sbjct: 436 gccttctgcctgttttgctctgaaaatcgcccaaagatcaaaattgaatacccgggcctg 495 Query: 1034 tccattggtgatgttgcgaagaaactgggagagatgtgg 1072 || ||||| ||| ||||||||||||||| ||||||||| Sbjct: 496 tctattggagatactgcgaagaaactgggtgagatgtgg 534 Score = 60.0 bits (30), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 31 ggcaaaatgtcatcatatgcattttttgtgcaaacttgtcgggaggagcataagaagaag 90 ||||||||||| || || || ||||||||||| || || ||||||||||| ||||||||| Sbjct: 166 ggcaaaatgtcctcttacgccttttttgtgcagacctgccgggaggagcacaagaagaag 225 Query: 91 ca 92 || Sbjct: 226 ca 227 >J02895 Pig non-histone chromosomal protein (HMG2) mRNA, complete cds. Length = 1153 Score = 61.9 bits (31), Expect = 4e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 974 gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg 1033 ||||||||||| || |||||||| |||||||||| |||||| | ||||| |||||| | Sbjct: 444 gccttcttcctgttttgctctgaacatcgcccaaagatcaaaagtgaacaccctggctta 503 Query: 1034 tccattggtgatgttgcgaagaaactgggagagatgtgg 1072 |||||||| ||| ||| |||||| |||| || |||||| Sbjct: 504 tccattggggatactgcaaagaaattgggtgaaatgtgg 542 Score = 58.0 bits (29), Expect = 6e-06 Identities = 68/81 (83%) Strand = Plus / Plus Query: 70 cgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagagttttctaag 129 ||||||||||| |||||||| ||||| ||| | || ||||||||| | ||||| || ||| Sbjct: 213 cgggaggagcacaagaagaaacaccccgattcctcggtcaacttcgccgagttctccaag 272 Query: 130 aagtgctcagagaggtggaag 150 |||||||| ||| | |||||| Sbjct: 273 aagtgctccgagcgatggaag 293 Score = 38.2 bits (19), Expect = 5.5 Identities = 37/43 (86%) Strand = Plus / Plus Query: 1103 tatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaagg 1145 |||||| |||| || || ||||| ||||||||||| ||||||| Sbjct: 573 tatgaacagaaagcagctaagctaaaggaaaaatatgaaaagg 615 >D30765 Xenopus laevis mRNA for HMG-X protein, complete cds. Length = 1081 Score = 60.0 bits (30), Expect = 2e-06 Identities = 120/150 (80%) Strand = Plus / Plus Query: 1 atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg 60 |||||||| ||||||||||| ||||| | || || ||||| || || || | ||| ||| Sbjct: 105 atgggcaagggagatcctaacaagcctcgggggaagatgtcctcctacgcctatttcgtg 164 Query: 61 caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag 120 || || || |||||||||| |||||||||||||| || | || ||||||||||| || Sbjct: 165 cagacctgcagggaggagcacaagaagaagcacccggacacctccgtcaacttctccgac 224 Query: 121 ttttctaagaagtgctcagagaggtggaag 150 || || ||||| ||||| ||||| |||||| Sbjct: 225 ttctccaagaaatgctccgagagatggaag 254 Score = 38.2 bits (19), Expect = 5.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 402 atgaaaacctatatccctcccaaaggggagacaaa 436 ||||| ||||||||||| || ||||| |||||||| Sbjct: 327 atgaagacctatatcccaccaaaaggagagacaaa 361 >L32954 Rainbow trout HMG-T2 gene exons 1-4, complete cds. Length = 1368 Score = 54.0 bits (27), Expect = 9e-05 Identities = 48/55 (87%) Strand = Plus / Plus Query: 101 cttcagtcaacttctcagagttttctaagaagtgctcagagaggtggaaggtaag 155 ||||||| ||||| || ||||| || ||||| |||||||||||||||| |||||| Sbjct: 130 cttcagtgaacttttccgagttctcaaagaaatgctcagagaggtggagggtaag 184 >M83235 Gallus gallus non-histone chromosomal protein (HMG2) mRNA, complete Length = 1083 Score = 52.0 bits (26), Expect = 4e-04 Identities = 65/78 (83%) Strand = Plus / Plus Query: 73 gaggagcataagaagaagcacccagatgcttcagtcaacttctcagagttttctaagaag 132 |||||||| |||||||||||||| || | |||||||||||| | ||||| || |||| Sbjct: 155 gaggagcacaagaagaagcacccggactcgtcagtcaacttcgccgagttctcgcggaag 214 Query: 133 tgctcagagaggtggaag 150 ||||| ||| |||||||| Sbjct: 215 tgctcggagcggtggaag 232 >AF003626 Homo sapiens cosmids IM0525, LC1233, Qc3C1, LB1439, Qc12C11 and Length = 86769 Score = 50.1 bits (25), Expect = 0.001 Identities = 31/33 (93%) Strand = Plus / Plus Query: 121 ttttctaagaagtgctcagagaggtggaaggta 153 ||||| ||||||||||| ||||||||||||||| Sbjct: 66881 ttttccaagaagtgctctgagaggtggaaggta 66913 >M80574 Gallus domesticus high-mobility group-2 protein (HMG-2) mRNA, Length = 995 Score = 46.1 bits (23), Expect = 0.023 Identities = 62/75 (82%) Strand = Plus / Plus Query: 76 gagcataagaagaagcacccagatgcttcagtcaacttctcagagttttctaagaagtgc 135 ||||| |||||||||||||| || | |||||||||||| | ||||| || ||||||| Sbjct: 175 gagcacaagaagaagcacccggactcgtcagtcaacttcgccgagttctcgcggaagtgc 234 Query: 136 tcagagaggtggaag 150 || ||| |||||||| Sbjct: 235 tcggagcggtggaag 249 >X80869 P.citri gene for cytochrome oxidase subunit I Length = 366 Score = 46.1 bits (23), Expect = 0.023 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1627 tatagttcagtaaattgaaatattaaa 1653 ||||| ||||||||||||||||||||| Sbjct: 276 tatagatcagtaaattgaaatattaaa 250 >AF022465 Mus musculus high mobility group protein homolog HMG4 (Hmg4) mRNA, Length = 1502 Score = 44.1 bits (22), Expect = 0.090 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1025 cctggcctgtccattggtgatgttgcgaagaaactgggagagatgtggaataac 1078 |||||| | |||||||| ||||| || || || ||||| ||||||||||||||| Sbjct: 373 cctggcatctccattggagatgtggcaaaaaagctgggtgagatgtggaataac 426 Score = 42.1 bits (21), Expect = 0.36 Identities = 84/105 (80%) Strand = Plus / Plus Query: 46 tatgcattttttgtgcaaacttgtcgggaggagcataagaagaagcacccagatgcttca 105 ||||| || |||||||| || || |||| || ||||||||||| ||||||| | | | Sbjct: 73 tatgccttctttgtgcagacatgcagggaagaacataagaagaaaaacccagaggttccc 132 Query: 106 gtcaacttctcagagttttctaagaagtgctcagagaggtggaag 150 ||||| || | ||||| || ||||||||||| |||||||||||| Sbjct: 133 gtcaattttgctgagttctccaagaagtgctcggagaggtggaag 177 >AC002510 Arabidopsis thaliana chromosome II BAC T32G6 genomic sequence, Length = 91979 Score = 44.1 bits (22), Expect = 0.090 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 aacttaaacttacaaattaattattt 324 ||||||||||||||| |||||||||| Sbjct: 75922 aacttaaacttacaagttaattattt 75947 >AB009838 Loligo bleekeri mitochondrial DNA, complete sequence. Length = 8148 Score = 44.1 bits (22), Expect = 0.090 Identities = 22/22 (100%) Strand = Plus / Minus Query: 610 ttatatttaaatagtataaaat 631 |||||||||||||||||||||| Sbjct: 6884 ttatatttaaatagtataaaat 6863 >Y10043 Homo sapiens mRNA for high mobility group protein HMG2a Length = 1633 Score = 44.1 bits (22), Expect = 0.090 Identities = 28/30 (93%) Strand = Plus / Plus Query: 121 ttttctaagaagtgctcagagaggtggaag 150 ||||| ||||||||||| |||||||||||| Sbjct: 207 ttttccaagaagtgctctgagaggtggaag 236 >AC004008 Human PAC clone DJ0899B21 from 7p15-p21, complete sequence. Length = 90389 Score = 42.1 bits (21), Expect = 0.36 Identities = 24/25 (96%) Strand = Plus / Plus Query: 703 tttgatctttttatttcttgaaaaa 727 |||||| |||||||||||||||||| Sbjct: 74760 tttgatttttttatttcttgaaaaa 74784 >AE001182;AE000783 Borrelia burgdorferi (section 68 of 70) of the complete genome. Length = 11228 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1861 ggttttaatagagttaggat 1880 |||||||||||||||||||| Sbjct: 2644 ggttttaatagagttaggat 2663 >AE000963;AE000782 Archaeoglobus fulgidus section 144 of 172 of the complete genome. Length = 22014 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gaagtgctcagagaggtgga 148 |||||||||||||||||||| Sbjct: 4060 gaagtgctcagagaggtgga 4079 >U60491 Nicotiana tabacum actin (Tob66) gene, partial cds. Length = 1677 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 agaaaggaaaatttgaagat 365 |||||||||||||||||||| Sbjct: 934 agaaaggaaaatttgaagat 915 >AB001684 Chlorella vulgaris C-27 chloroplast DNA, complete sequence. Length = 150613 Score = 40.1 bits (20), Expect = 1.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 700 ccttttgatctttttatttcttgaaaaa 727 ||||||||||||||| ||| |||||||| Sbjct: 142202 ccttttgatcttttttttttttgaaaaa 142175 >Z50742 Caenorhabditis elegans cosmid K09A11 Length = 20856 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1422 aaaaatgagcattttcaaat 1441 |||||||||||||||||||| Sbjct: 3011 aaaaatgagcattttcaaat 2992 >X64643 H.sapiens c6.1A mRNA Length = 2407 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agagaaatgaaaacctatat 415 |||||||||||||||||||| Sbjct: 2198 agagaaatgaaaacctatat 2217 >Z83838 Human DNA sequence from PAC 127B20 on chromosome 22q11.2-qter, Length = 135258 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 aagagaaatgaaaacctatatccc 418 ||||||||||||||||| |||||| Sbjct: 123039 aagagaaatgaaaacctgtatccc 123062 >L77118 Methanococcus jannaschii large extra-chromosomal element, complete Length = 58407 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1513 aacatttatgttcttttccttta 1535 |||||||||||| |||||||||| Sbjct: 5014 aacatttatgttgttttccttta 5036 >L08814 Rat CIIDBP (homologous to human SSRP-1 and mouse T160 genes) mRNA, Length = 2082 Score = 38.2 bits (19), Expect = 5.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 447 aaggatcccaatgcacccaagaggcct 473 |||||||| ||||| |||||||||||| Sbjct: 1180 aaggatccaaatgcccccaagaggcct 1206 >M18222;J03590 Mouse CD3-delta (T3-delta) gene, 5' end; and CD3-gamma (T3-gamma) Length = 1726 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 857 caatgcatcacagaaattcacag 879 |||||||| |||||||||||||| Sbjct: 990 caatgcataacagaaattcacag 968 >X95600 M.musculus mRNA for cadherin-8 Length = 2812 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1422 cttgaagttcatgaaaatg 1440 >AB010437 Rattus rattus rCdh8-a1 mRNA for cadherin-8, complete cds. Length = 3015 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1725 cttgaagttcatgaaaatg 1743 >AB010436 Rattus rattus rCdh8 mRNA for cadherin-8, complete cds. Length = 3126 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1725 cttgaagttcatgaaaatg 1743 >AL021633 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16 (ESSAII project) Length = 93037 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1659 aattttcagctttagtcat 1677 ||||||||||||||||||| Sbjct: 29677 aattttcagctttagtcat 29659 >I55098 Sequence 53 from patent US 5646250. Length = 2550 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1177 cttgaagttcatgaaaatg 1195 >I55093 Sequence 43 from patent US 5646250. Length = 3043 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1733 cttgaagttcatgaaaatg 1751 >I55092 Sequence 41 from patent US 5646250. Length = 3136 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1733 cttgaagttcatgaaaatg 1751 >I46829 Sequence 47 from patent US 5639634. Length = 2550 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1177 cttgaagttcatgaaaatg 1195 >I34431 Sequence 53 from patent US 5597725. Length = 2550 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1177 cttgaagttcatgaaaatg 1195 >I34426 Sequence 43 from patent US 5597725. Length = 3043 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1733 cttgaagttcatgaaaatg 1751 >I34425 Sequence 41 from patent US 5597725. Length = 3136 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1733 cttgaagttcatgaaaatg 1751 >Z47547 C.crispus complete mitochondrial genome. Length = 25836 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 707 atctttttatttcttgaaaaata 729 |||||||||||| |||||||||| Sbjct: 4779 atctttttattttttgaaaaata 4801 >Z46224 C.crispus Mitochondrion gene for large subunit ribosomal RNA Length = 2583 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 707 atctttttatttcttgaaaaata 729 |||||||||||| |||||||||| Sbjct: 1091 atctttttattttttgaaaaata 1113 >U84139 Bos taurus structure-specific recognition protein 1 (SSRP1) mRNA, Length = 1834 Score = 38.2 bits (19), Expect = 5.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 446 caaggatcccaatgcacccaagaggcc 472 |||||| |||||||| ||||||||||| Sbjct: 876 caaggaccccaatgcccccaagaggcc 902 >AL010134 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from contig Length = 57824 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1512 aaacatttatgttcttttccttt 1534 |||||||| |||||||||||||| Sbjct: 41809 aaacatttctgttcttttccttt 41787 >Z99281 Caenorhabditis elegans cosmid Y57G11C Length = 313573 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 279 ataatttacttaaatgtta 297 ||||||||||||||||||| Sbjct: 64328 ataatttacttaaatgtta 64310 >Z35597 Caenorhabditis elegans cosmid C36E8 Length = 31808 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1423 aaaatgagcattttcaaatggct 1445 |||||||||||||| |||||||| Sbjct: 15395 aaaatgagcattttgaaatggct 15373 >AF003386 Caenorhabditis elegans cosmid F59E12. Length = 42430 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 308 ttacaaattaattattttg 326 ||||||||||||||||||| Sbjct: 30744 ttacaaattaattattttg 30762 >Z30950 C.crispus mitochondrial gene for small subunit ribosomal RNA, NADH- Length = 3235 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 707 atctttttatttcttgaaaaata 729 |||||||||||| |||||||||| Sbjct: 2864 atctttttattttttgaaaaata 2886 >AF026208 Caenorhabditis elegans cosmid F52D1. Length = 29138 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 711 ttttatttcttgaaaaata 729 ||||||||||||||||||| Sbjct: 17793 ttttatttcttgaaaaata 17775 >Z69712 Human DNA sequence from cosmid N12G10, on chromosome 22q11.2-qter. Length = 45353 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 614 atttaaatagtataaaatt 632 ||||||||||||||||||| Sbjct: 44395 atttaaatagtataaaatt 44413 >Z84495 Human DNA sequence from cosmid LUCA8 Length = 28031 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 975 ccttcttcctcttctgctc 993 ||||||||||||||||||| Sbjct: 2973 ccttcttcctcttctgctc 2955 >L81635 Homo sapiens (subclone 2_c11 from P1 H33) DNA sequence, complete Length = 4078 Score = 38.2 bits (19), Expect = 5.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 395 aagagaaatgaaaacctatatcc 417 ||||||||||||||| ||||||| Sbjct: 1988 aagagaaatgaaaacatatatcc 2010 >Z68754 Human DNA sequence from cosmid cE78H10, on chromosome 22q11.2-qter. Length = 24888 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 614 atttaaatagtataaaatt 632 ||||||||||||||||||| Sbjct: 19682 atttaaatagtataaaatt 19700 >L34060 Homo sapiens cadherin-8 mRNA, complete cds. Length = 2545 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1384 cttgaagttcatgaaaatg 1402 ||||||||||||||||||| Sbjct: 1177 cttgaagttcatgaaaatg 1195 >AC002378 Human PAC clone DJ438O4 from 22q12.1-qter, complete sequence. Length = 77516 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1422 aaaaatgagcattttcaaa 1440 ||||||||||||||||||| Sbjct: 1772 aaaaatgagcattttcaaa 1754 >AC002124 Human BAC clone RG180O01 from 7p15-p21, complete sequence. Length = 100923 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 302 ttaaacttacaaattaatt 320 ||||||||||||||||||| Sbjct: 91664 ttaaacttacaaattaatt 91682 >Z93931 Human DNA sequence from PAC 438G17 on chromosome 6q22. Contains Length = 148198 Score = 38.2 bits (19), Expect = 5.5 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 cagagttttctaagaagtgctcagagaggtggaag 150 |||| ||||| ||||| ||||| |||||||||||| Sbjct: 95695 cagaattttccaagaattgctctgagaggtggaag 95661 >AL008907 H.sapiens STS from genomic clone 404F18. Length = 348 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1097 cagccttatgaaaagaagg 1115 ||||||||||||||||||| Sbjct: 95 cagccttatgaaaagaagg 77 >AC004130 Homo sapiens BAC clone RG293F17 from 7p15-p21, complete sequence. Length = 116215 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2128 atcctccctttgctttgga 2146 ||||||||||||||||||| Sbjct: 10116 atcctccctttgctttgga 10098 >AC004000 Human PAC clone DJ404F18 from Xq23, complete sequence. Length = 128117 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1097 cagccttatgaaaagaagg 1115 ||||||||||||||||||| Sbjct: 128007 cagccttatgaaaagaagg 128025 >AC003683 Homo sapiens Xp22 PAC RPCI1-147H15 (Research Park PAC library) Length = 127683 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 357 tttgaagatatggcaaaag 375 ||||||||||||||||||| Sbjct: 118606 tttgaagatatggcaaaag 118588 >AC003013 Human PAC clone DJ0205E24 from Xq23, complete sequence. Length = 173452 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 395 aagagaaatgaaaacctat 413 ||||||||||||||||||| Sbjct: 88016 aagagaaatgaaaacctat 87998 >AC002556 Human Chromosome 11 pac pDJ9j14, complete sequence. Length = 123234 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 395 aagagaaatgaaaacctat 413 ||||||||||||||||||| Sbjct: 21414 aagagaaatgaaaacctat 21432 Database: embl.fas Posted date: May 15, 1998 5:37 PM Number of letters in database: 675,252,082 Number of sequences in database: 442,729 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1123218 Number of Sequences: 442729 Number of extensions: 1123218 Number of successful extensions: 86816 Number of sequences better than 10.0: 106 length of query: 2575 length of database: 675,252,082 effective HSP length: 21 effective length of query: 2554 effective length of database: 665,954,773 effective search space: 1700848490242 effective search space used: 1700848490242 T: 0 A: 0 X1: 6 (11.9 bits) X2: 10 (19.8 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)